1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
|
# Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from spack.package import *
class Prank(Package):
"""A powerful multiple sequence alignment browser."""
homepage = "http://wasabiapp.org/software/prank/"
url = "http://wasabiapp.org/download/prank/prank.source.170427.tgz"
version('170427', sha256='623eb5e9b5cb0be1f49c3bf715e5fabceb1059b21168437264bdcd5c587a8859')
depends_on('mafft')
depends_on('exonerate')
depends_on('bpp-suite') # for bppancestor
conflicts('%gcc@7.2.0', when='@:150803')
def install(self, spec, prefix):
with working_dir('src'):
filter_file('gcc', '{0}'.format(spack_cc),
'Makefile', string=True)
filter_file('g++', '{0}'.format(spack_cxx),
'Makefile', string=True)
if not spec.target.family == 'x86_64':
filter_file('-m64', '', 'Makefile', string=True)
filter_file('-pipe', '', 'Makefile', string=True)
make()
mkdirp(prefix.bin)
install('prank', prefix.bin)
|
