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# Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from spack.package import *
class PyHtseq(PythonPackage):
"""HTSeq is a Python package that provides infrastructure to process
data from high-throughput sequencing assays."""
homepage = "https://htseq.readthedocs.io/en/release_0.9.1/overview.html"
url = "https://github.com/simon-anders/htseq/archive/release_0.9.1.tar.gz"
version("0.11.2", sha256="dfc707effa699d5ba9034e1bb9f13c0fb4e9bc60d31ede2444aa49c7e2fc71aa")
version("0.9.1", sha256="28b41d68aa233fce0d57699e649b69bb11957f8f1b9b7b82dfe3415849719534")
depends_on("py-setuptools", type="build")
depends_on("py-numpy", type=("build", "run"))
depends_on("py-pysam", type=("build", "run"))
depends_on("py-matplotlib", type=("build", "run"))
depends_on("py-cython", type=("build", "run"))
depends_on("swig", type=("build", "run"))
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