1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
|
# Copyright 2013-2020 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from spack import *
class PyNetcdf4(PythonPackage):
"""Python interface to the netCDF Library."""
homepage = "https://github.com/Unidata/netcdf4-python"
pypi = "netCDF4/netCDF4-1.2.7.tar.gz"
maintainers = ['skosukhin']
version('1.5.3', sha256='2a3ca855848f4bbf07fac366da77a681fcead18c0a8813d91d46302f562dc3be')
version('1.4.2', sha256='b934af350459cf9041bcdf5472e2aa56ed7321c018d918e9f325ec9a1f9d1a30')
version('1.2.7', sha256='0c449b60183ee06238a8f9a75de7b0eed3acaa7a374952ff9f1ff06beb8f94ba')
version('1.2.3.1', sha256='55edd74ef9aabb1f7d1ea3ffbab9c555da2a95632a97f91c0242281dc5eb919f')
depends_on('py-setuptools', type='build')
depends_on('py-cython@0.19:', type='build')
depends_on('py-numpy@1.7:', type=('build', 'run'))
depends_on('py-cftime', type=('build', 'run'))
depends_on('netcdf-c')
depends_on('hdf5@1.8.0:+hl')
# The installation script tries to find hdf5 using pkg-config. However, the
# version of hdf5 installed with Spack does not have pkg-config files.
# Therefore, if pkg-config finds hdf5.pc at all (e.g. provided by
# Ubuntu/Debian package manager), it is definitely not what we need. The
# following patch disables the usage of pkg-config at all.
patch('disable_pkgconf.patch')
# Older versions of the package get a false negative result when checking
# the version of HDF5.
patch('check_hdf5version.patch', when='@:1.2.9 ^hdf5@1.10:')
# We can skip the 'build' phase to avoid recompilation of the library.
phases = ['install']
def setup_build_environment(self, env):
"""Ensure installed netcdf and hdf5 libraries are used"""
# Explicitly set these variables so setup.py won't erroneously pick up
# system versions
# See: http://unidata.github.io/netcdf4-python
env.set('USE_SETUPCFG', '0')
env.set('USE_NCCONFIG', '1')
env.set('HDF5_DIR', self.spec['hdf5'].prefix)
env.set('HDF5_INCDIR', self.spec['hdf5'].prefix.include)
env.set('HDF5_LIBDIR', self.spec['hdf5'].prefix.lib)
env.set('NETCDF4_DIR', self.spec['netcdf-c'].prefix)
env.set('NETCDF4_INCDIR', self.spec['netcdf-c'].prefix.include)
env.set('NETCDF4_LIBDIR', self.spec['netcdf-c'].prefix.lib)
|
