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# Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)


from spack.package import *


class PyPyvolve(PythonPackage):
    """Pyvolve is an open-source Python module for simulating sequences
       along a phylogenetic tree according to continuous-time Markov models
       of sequence evolution"""

    homepage = "https://github.com/sjspielman/pyvolve"
    pypi     = "Pyvolve/Pyvolve-1.1.0.tar.gz"

    version('1.1.0', sha256='850aae6213a95c3f8c438ef7cdab33f4dafe8ef305b6fa85bbea1a9e7484c787')
    version('1.0.3', sha256='725d5851f24b3b4564970a999bad8e2e90782cf81a07c3a3370c492a956d9d51')

    depends_on('py-setuptools',    type='build')
    depends_on('py-biopython',     type=('build', 'run'))
    depends_on('py-numpy@1.20.0:', type=('build', 'run'), when='@1.1.0:')
    depends_on('py-numpy@1.7:',    type=('build', 'run'), when='@1.0.3:')
    depends_on('py-scipy',         type=('build', 'run'))