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# Copyright 2013-2018 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from spack import *
class PyTetoolkit(PythonPackage):
"""TEToolkit is a software package that utilizes both unambiguously
(uniquely) and ambiguously (multi-) mapped reads to perform
differential enrichment analyses from high throughput sequencing
experiments."""
homepage = "http://hammelllab.labsites.cshl.edu/software"
url = "https://pypi.io/packages/source/T/TEToolkit/TEToolkit-1.5.1.tar.gz"
version('1.5.1', '05745b2d5109911e95593e423446a831')
depends_on('py-setuptools')
depends_on('python@2.7:', type=('build', 'run'))
depends_on('py-pysam', type=('build', 'run'))
depends_on('r-deseq', type=('build', 'run'))
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