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# Copyright 2013-2021 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from spack import *
class PyTomopy(PythonPackage):
"""TomoPy is an open-source Python package for tomographic data
processing and image reconstruction."""
homepage = "https://tomopy.readthedocs.io/en/latest/index.html"
url = "https://github.com/tomopy/tomopy/archive/1.0.0.tar.gz"
git = 'https://github.com/tomopy/tomopy.git'
version('master', branch='master')
version('1.10.4', sha256='2f15edda11b4337a1a5560684fcf8f28a35c5035932b22b842ce728bd13fba01')
version('1.0.0', sha256='ee45f7a062e5a66d6f18a904d2e204e48d85a1ce1464156f9e2f6353057dfe4c')
# GPU accel needs PTL which is a git submodule. Thus, we can only build it on master
depends_on('cuda', when='@master')
# The shared opencv is not found by during runtest. Not using GOT/PLT is faster too
depends_on('opencv+imgproc~shared@3.4:', when='@master')
# During the runtest, the shared MKL libs aren't found yet:
# depends_on('intel-mkl~shared')
depends_on('cmake@3.17:', type=('build'))
depends_on('ninja', type=('build'))
depends_on('py-setuptools-scm', type=('build'))
depends_on('py-setuptools-scm-git-archive', type=('build'))
# Note: The module name of py-scikit-build is skbuild:
depends_on('py-scikit-build', type=('build'))
depends_on('py-scikit-image@0.17:', type=('build', 'run'))
depends_on('py-numpy+blas', type=('build', 'run'))
depends_on('py-pyfftw', type=('build', 'run'), when='@1.0:1.9')
depends_on('py-scipy', type=('build', 'run'))
depends_on('py-setuptools', type='build')
depends_on('py-h5py', type=('build', 'run'))
depends_on('py-six', type=('build', 'run'))
depends_on('py-pywavelets', type=('build', 'run'))
depends_on('py-dxchange', type=('build', 'run'))
@when('@1.10:')
def install_options(self, spec, prefix):
args = ['--enable-arch']
if 'avx512' in self.spec.target:
args.append('--enable-avx512')
# PTL is a git submodule, we only fetch it's source by git-submodule on master:
if self.version != Version('master'):
args.append('--disable-tasking')
return args
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