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# Copyright 2013-2018 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from spack import *
class RAffycoretools(RPackage):
"""Various wrapper functions that have been written to streamline
the more common analyses that a core Biostatistician might see."""
homepage = "https://www.bioconductor.org/packages/affycoretools/"
git = "https://git.bioconductor.org/packages/affycoretools.git"
version('1.48.0', commit='e0d52e34eead1ac45d3e60c59efd940e4889eb99')
depends_on('r@3.4.0:3.4.9', when='@1.48.0')
depends_on('r-biobase', type=('build', 'run'))
depends_on('r-affy', type=('build', 'run'))
depends_on('r-limma', type=('build', 'run'))
depends_on('r-gostats', type=('build', 'run'))
depends_on('r-gcrma', type=('build', 'run'))
depends_on('r-xtable', type=('build', 'run'))
depends_on('r-annotationdbi', type=('build', 'run'))
depends_on('r-ggplot2', type=('build', 'run'))
depends_on('r-gplots', type=('build', 'run'))
depends_on('r-oligoclasses', type=('build', 'run'))
depends_on('r-reportingtools', type=('build', 'run'))
depends_on('r-hwriter', type=('build', 'run'))
depends_on('r-lattice', type=('build', 'run'))
depends_on('r-s4vectors', type=('build', 'run'))
depends_on('r-edger', type=('build', 'run'))
depends_on('r-rsqlite', type=('build', 'run'))
depends_on('r-biocgenerics', type=('build', 'run'))
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