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# Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)

from spack import *


class RAffypdnn(RPackage):
    """Probe Dependent Nearest Neighbours (PDNN) for the affy package.

       The package contains functions to perform the PDNN method described by
       Li Zhang et al."""

    bioc = "affypdnn"

    version('1.58.0', commit='83d8b6b0d9606845bd77dbf7164dd5b160f32ccf')
    version('1.56.0', commit='5fd9c5265fb895a1f646cf72e8d5169669d979f2')
    version('1.54.0', commit='ea971b1b9cc443695a6614bef92e8e116ee87d55')
    version('1.52.0', commit='17d74c593ce4f0dfd43f13a5016e482c1399d21e')
    version('1.50.0', commit='97ff68e9f51f31333c0330435ea23b212b3ed18a')

    depends_on('r@2.13.0:', type=('build', 'run'))
    depends_on('r-affy@1.5:', type=('build', 'run'))