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# Copyright 2013-2020 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from spack import *
class RAmpliqueso(RPackage):
"""Analysis of amplicon enrichment panels.
The package provides tools and reports for the analysis of amplicon
sequencing panels, such as AmpliSeq"""
homepage = "https://bioconductor.org/packages/3.8/bioc/html/ampliQueso.html"
git = "https://git.bioconductor.org/packages/ampliQueso.git"
version('1.21.0', commit='ed99c5194a452ee299a93e981da2224e4dab5bdd')
version('1.20.0', commit='ed064ffe9c5f2b47136e5f0f2e2c4214af4deae8')
version('1.18.0', commit='c27fa51094135ef8da52cd2b34a27ec6454abd8e')
version('1.16.0', commit='25d2543ff9dedef4f966f999c95cdf87185d3bb3')
version('1.14.0', commit='9a4c26ec594171279aba8ab7fe59c4a2ea09b06b')
depends_on('r@2.15.0:', type=('build', 'run'))
depends_on('r-rnaseqmap@2.17.1:', type=('build', 'run'))
depends_on('r-knitr', type=('build', 'run'))
depends_on('r-rgl', type=('build', 'run'))
depends_on('r-ggplot2', type=('build', 'run'))
depends_on('r-gplots', type=('build', 'run'))
depends_on('r-doparallel', type=('build', 'run'))
depends_on('r-foreach', type=('build', 'run'))
depends_on('r-variantannotation', type=('build', 'run'))
depends_on('r-genefilter', type=('build', 'run'))
depends_on('r-statmod', type=('build', 'run'))
depends_on('r-xtable', type=('build', 'run'))
depends_on('r-edger', type=('build', 'run'))
depends_on('r-deseq', type=('build', 'run'))
depends_on('r-samr', type=('build', 'run'))
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