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# Copyright 2013-2018 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from spack import *
class RBiovizbase(RPackage):
"""The biovizBase package is designed to provide a set of
utilities, color schemes and conventions for genomic data.
It serves as the base for various high-level packages for
biological data visualization. This saves development effort
and encourages consistency."""
homepage = "http://bioconductor.org/packages/biovizBase/"
git = "https://git.bioconductor.org/packages/biovizBase.git"
version('1.24.0', commit='ae9cd2ff665b74a8f45ed9c1d17fc0a778b4af6c')
depends_on('r@3.4.0:3.4.9', when='@1.24.0')
depends_on('r-scales', type=('build', 'run'))
depends_on('r-hmisc', type=('build', 'run'))
depends_on('r-rcolorbrewer', type=('build', 'run'))
depends_on('r-dichromat', type=('build', 'run'))
depends_on('r-biocgenerics', type=('build', 'run'))
depends_on('r-s4vectors', type=('build', 'run'))
depends_on('r-iranges', type=('build', 'run'))
depends_on('r-genomeinfodb', type=('build', 'run'))
depends_on('r-genomicranges', type=('build', 'run'))
depends_on('r-summarizedexperiment', type=('build', 'run'))
depends_on('r-biostrings', type=('build', 'run'))
depends_on('r-rsamtools', type=('build', 'run'))
depends_on('r-genomicalignments', type=('build', 'run'))
depends_on('r-genomicfeatures', type=('build', 'run'))
depends_on('r-annotationdbi', type=('build', 'run'))
depends_on('r-variantannotation', type=('build', 'run'))
depends_on('r-ensembldb', type=('build', 'run'))
depends_on('r-annotationfilter', type=('build', 'run'))
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