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# Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from spack.package import *
class RBsgenome(RPackage):
"""Software infrastructure for efficient representation of full genomes and
their SNPs.
Infrastructure shared by all the Biostrings-based genome data packages."""
bioc = "BSgenome"
version('1.62.0', commit='9b1859e11ffa082833f035a45274af6e4e83e863')
version('1.58.0', commit='3a4926e03a7a1d7140a10c1b2bf6090808470145')
version('1.52.0', commit='5398eba1cb56a873b29c04a7ce6858d5d60ff75b')
version('1.50.0', commit='43910755f7477e4fe9bb968f186fddbb2f7355f9')
version('1.48.0', commit='092a1b90482ace329cbd8ca2a338e91449acb93e')
version('1.46.0', commit='bdfbd6d09820993585b8231ddea5e11c99008dc5')
version('1.44.2', commit='105b00588a758d5ec7c347a7dff2756aea4516a0')
depends_on('r@2.8.0:', type=('build', 'run'))
depends_on('r-biocgenerics@0.13.8:', type=('build', 'run'))
depends_on('r-s4vectors@0.9.36:', type=('build', 'run'))
depends_on('r-s4vectors@0.17.28:', type=('build', 'run'), when='@1.48.0:')
depends_on('r-iranges@2.1.33:', type=('build', 'run'))
depends_on('r-iranges@2.11.16:', type=('build', 'run'), when='@1.46.0:')
depends_on('r-iranges@2.13.16:', type=('build', 'run'), when='@1.48.0:')
depends_on('r-genomeinfodb@1.11.4:', type=('build', 'run'))
depends_on('r-genomeinfodb@1.13.1:', type=('build', 'run'), when='@1.46.0:')
depends_on('r-genomeinfodb@1.15.2:', type=('build', 'run'), when='@1.48.0:')
depends_on('r-genomeinfodb@1.25.6:', type=('build', 'run'), when='@1.58.0:')
depends_on('r-genomicranges@1.27.6:', type=('build', 'run'))
depends_on('r-genomicranges@1.29.14:', type=('build', 'run'), when='@1.46.0:')
depends_on('r-genomicranges@1.31.10:', type=('build', 'run'), when='@1.48.0:')
depends_on('r-biostrings@2.35.3:', type=('build', 'run'))
depends_on('r-biostrings@2.47.6:', type=('build', 'run'), when='@1.48.0:')
depends_on('r-rtracklayer@1.25.8:', type=('build', 'run'))
depends_on('r-rtracklayer@1.39.7:', type=('build', 'run'), when='@1.48.0:')
depends_on('r-matrixstats', type=('build', 'run'), when='@1.58.0:')
depends_on('r-xvector', type=('build', 'run'))
depends_on('r-xvector@0.29.3:', type=('build', 'run'), when='@1.58.0:')
depends_on('r-rsamtools', type=('build', 'run'))
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