blob: 819983efa92e33aeaeb8bcc6a7e85f98c6c141f8 (
plain) (
blame)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
|
# Copyright 2013-2021 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from spack import *
class RGenie3(RPackage):
"""GEne Network Inference with Ensemble of trees
This package implements the GENIE3 algorithm for inferring gene
regulatory networks from expression data."""
homepage = "https://bioconductor.org/packages/GENIE3"
git = "https://git.bioconductor.org/packages/GENIE3.git"
version('1.12.0', commit='14289cee9bed113ab35ba03bcaac4a30e5784497')
version('1.6.0', commit='d6a49182e098342afe77f01c322dfc7b72450502')
version('1.4.3', commit='ae719c759f23f09d28fcf1acc45b860cd7761f08')
version('1.2.1', commit='1b56fe8184d521d1bb247f000efe9e2b540604c9')
version('1.0.0', commit='eb7c95ed12ea50d61e8fa20bc2b25ae9d74c302f')
depends_on('r-reshape2', type=('build', 'run'))
|
