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# Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)

from spack import *


class RIsva(RPackage):
    """Independent Surrogate Variable Analysis.

    Independent Surrogate Variable Analysis is an algorithm for feature
    selection in the presence of potential confounding factors (see
    Teschendorff AE et al 2011, <doi:10.1093/bioinformatics/btr171>)."""

    cran = "isva"

    version('1.9', sha256='9fd016e0b34034d271d45f8a0d0db62780bf0187112e45f610aa9237014e1d17')

    depends_on('r-qvalue', type=('build', 'run'))
    depends_on('r-fastica', type=('build', 'run'))
    depends_on('r-jade', type=('build', 'run'))