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# Copyright 2013-2021 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from spack import *
class RMsnbase(RPackage):
"""Base Functions and Classes for Mass Spectrometry and Proteomics.
MSnbase provides infrastructure for manipulation, processing and
visualisation of mass spectrometry and proteomics data, ranging from raw
to quantitative and annotated data."""
homepage = "https://bioconductor.org/packages/MSnbase"
git = "https://git.bioconductor.org/packages/MSnbase.git"
version('2.10.1', commit='4d5899bc9c714f0b1a70cddd537cd4621b2b53b0')
version('2.8.3', commit='ef883752c5e92d445647bc5b5d23d5df320db415')
version('2.6.4', commit='46836860ce0281eef135303f2e2948303d67f68c')
version('2.4.2', commit='c045d65daa730c7837852e6343a05cae9644ab5e')
version('2.2.0', commit='d6e8fb7f106d05096fa9074da0f829ac8f02c197')
depends_on('r@3.1:', type=('build', 'run'))
depends_on('r-biocgenerics@0.7.1:', type=('build', 'run'))
depends_on('r-biobase@2.15.2:', type=('build', 'run'))
depends_on('r-mzr@2.7.6:', type=('build', 'run'))
depends_on('r-biocparallel', type=('build', 'run'))
depends_on('r-protgenerics@1.5.1:', type=('build', 'run'))
depends_on('r-plyr', type=('build', 'run'))
depends_on('r-iranges', type=('build', 'run'))
depends_on('r-preprocesscore', type=('build', 'run'))
depends_on('r-vsn', type=('build', 'run'))
depends_on('r-affy', type=('build', 'run'))
depends_on('r-impute', type=('build', 'run'))
depends_on('r-pcamethods', type=('build', 'run'))
depends_on('r-mzid@1.5.2:', type=('build', 'run'))
depends_on('r-maldiquant@1.16:', type=('build', 'run'))
depends_on('r-digest', type=('build', 'run'))
depends_on('r-lattice', type=('build', 'run'))
depends_on('r-ggplot2', type=('build', 'run'))
depends_on('r-s4vectors', type=('build', 'run'))
depends_on('r-xml', type=('build', 'run'))
depends_on('r-rcpp', type=('build', 'run'))
depends_on('r-mzr@2.11.11:', when='@2.4.2:', type=('build', 'run'))
depends_on('r-protgenerics@1.9.1:', when='@2.4.2:', type=('build', 'run'))
depends_on('r-mzr@2.13.6:', when='@2.6.4:', type=('build', 'run'))
depends_on('r-iranges@2.13.28:', when='@2.6.4:', type=('build', 'run'))
depends_on('r-scales', when='@2.6.4:', type=('build', 'run'))
depends_on('r-mass', when='@2.6.4:', type=('build', 'run'))
depends_on('r-mzr@2.15.1:', when='@2.8.3:', type=('build', 'run'))
depends_on('r-mzr@2.17.3:', when='@2.10.1:', type=('build', 'run'))
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