1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
|
# Copyright 2013-2020 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from spack import *
class ROrdinal(RPackage):
"""Implementation of cumulative link (mixed) models also known as ordered
regression models, proportional odds models, proportional hazards models
for grouped survival times and ordered logit/probit/... models. Estimation
is via maximum likelihood and mixed models are fitted with the Laplace
approximation and adaptive Gauss-Hermite quadrature. Multiple random effect
terms are allowed and they may be nested, crossed or partially
nested/crossed. Restrictions of symmetry and equidistance can be imposed on
the thresholds (cut-points/intercepts). Standard model methods are
available (summary, anova, drop-methods, step, confint, predict etc.) in
addition to profile methods and slice methods for visualizing the
likelihood function and checking convergence."""
homepage = "https://github.com/runehaubo/ordinal"
url = "https://cloud.r-project.org/src/contrib/ordinal_2019.4-25.tar.gz"
list_url = "https://cloud.r-project.org/src/contrib/Archive/ordinal"
version('2019.4-25', sha256='2812ad7a123cae5dbe053d1fe5f2d9935afc799314077eac185c844e3c9d79df')
depends_on('r@2.13.0:', type=('build', 'run'))
depends_on('r-ucminf', type=('build', 'run'))
depends_on('r-mass', type=('build', 'run'))
depends_on('r-matrix', type=('build', 'run'))
depends_on('r-numderiv', type=('build', 'run'))
|
