summaryrefslogtreecommitdiff
path: root/var/spack/repos/builtin/packages/r-phylostratr/package.py
blob: bd518ba8659309fee4bc2c3ce8fe20d60fdea707 (plain) (blame)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
# Copyright 2013-2021 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)

from spack import *


class RPhylostratr(RPackage):
    """Predict and explore the age of genes using phylostratigraphic methods"""

    homepage = "https://github.com/arenasee/phylostratr"
    git      = "https://github.com/arendsee/phylostratr.git"

    version('20190323', commit='9f6d1ee2e93d973dabcfc72a44af9a032cb7ebbd')

    depends_on('r@3.4.0:', type=('build', 'run'))
    depends_on('r-ape', type=('build', 'run'))
    depends_on('r-biostrings', type=('build', 'run'))
    depends_on('r-curl', type=('build', 'run'))
    depends_on('r-dplyr', type=('build', 'run'))
    depends_on('r-ggplot2', type=('build', 'run'))
    depends_on('r-scales', type=('build', 'run'))
    depends_on('r-glue', type=('build', 'run'))
    depends_on('r-gridextra', type=('build', 'run'))
    depends_on('r-magrittr', type=('build', 'run'))
    depends_on('r-purrr', type=('build', 'run'))
    depends_on('r-readr', type=('build', 'run'))
    depends_on('r-reshape2', type=('build', 'run'))
    depends_on('r-rhmmer', type=('build', 'run'))
    depends_on('r-rlang@0.1.2:', type=('build', 'run'))
    depends_on('r-tibble', type=('build', 'run'))
    depends_on('r-taxizedb', type=('build', 'run'))
    depends_on('r-tidyr', type=('build', 'run'))