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# Copyright 2013-2021 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from spack import *
class RPopgenome(RPackage):
"""An Efficient Swiss Army Knife for Population Genomic Analyses
Provides efficient tools for population genomics data analysis, able to
process individual loci, large sets of loci, or whole genomes. PopGenome
<DOI:10.1093/molbev/msu136> not only implements a wide range of population
genetics statistics, but also facilitates the easy implementation of new
algorithms by other researchers. PopGenome is optimized for speed via the
seamless integration of C code."""
homepage = "https://popgenome.weebly.com"
url = "https://cloud.r-project.org/src/contrib/PopGenome_2.6.1.tar.gz"
list_url = "https://cloud.r-project.org/src/contrib/Archive/PopGenome"
version('2.7.5', sha256='d627b8ac87b4db6038d7349b2df20648d2fcfd48e2dafcd7f4731d1b607cbc75')
version('2.7.1', sha256='a84903b151528fa026ccaba42ada22cd89babbc1824afd40269b7204e488a5fa')
version('2.6.1', sha256='7a2922ed505fa801117a153e479d246bcf4854b91c6ab0241acc620a9d779b1c')
depends_on('r@2.14.2:', type=('build', 'run'))
depends_on('r-ff', type=('build', 'run'))
depends_on('zlib')
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