1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
|
# Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from spack.package import *
class RScuttle(RPackage):
"""Single-Cell RNA-Seq Analysis Utilities.
Provides basic utility functions for performing single-cell analyses,
focusing on simple normalization, quality control and data transformations.
Also provides some helper functions to assist development of other
packages."""
bioc = "scuttle"
version('1.6.2', commit='afdfc555151d84cc332757b4ec0b97cb7f39d2d5')
version('1.4.0', commit='b335263dd56bb859b5dd3ea27ee00dffa0215313')
version('1.0.4', commit='a827e2759d80e6c3510e2f8fd4bd680274206d9f')
depends_on('r-singlecellexperiment', type=('build', 'run'))
depends_on('r-matrix', type=('build', 'run'))
depends_on('r-rcpp', type=('build', 'run'))
depends_on('r-biocgenerics', type=('build', 'run'))
depends_on('r-s4vectors', type=('build', 'run'))
depends_on('r-biocparallel', type=('build', 'run'))
depends_on('r-genomicranges', type=('build', 'run'))
depends_on('r-summarizedexperiment', type=('build', 'run'))
depends_on('r-delayedarray', type=('build', 'run'))
depends_on('r-delayedmatrixstats', type=('build', 'run'))
depends_on('r-beachmat', type=('build', 'run'))
|
