1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
|
# Copyright 2013-2021 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from spack import *
class RScuttle(RPackage):
"""Single-Cell RNA-Seq Analysis Utilities
Provides basic utility functions for performing single-cell analyses,
focusing on simple normalization, quality control and data transformations.
Also provides some helper functions to assist development of other
packages."""
homepage = "https://bioconductor.org/packages/scuttle/"
git = "https://git.bioconductor.org/packages/scuttle"
version('1.0.4', commit='a827e2759d80e6c3510e2f8fd4bd680274206d9f')
depends_on('r-singlecellexperiment', type=('build', 'run'))
depends_on('r-matrix', type=('build', 'run'))
depends_on('r-rcpp', type=('build', 'run'))
depends_on('r-biocgenerics', type=('build', 'run'))
depends_on('r-s4vectors', type=('build', 'run'))
depends_on('r-biocparallel', type=('build', 'run'))
depends_on('r-genomicranges', type=('build', 'run'))
depends_on('r-summarizedexperiment', type=('build', 'run'))
depends_on('r-delayedarray', type=('build', 'run'))
depends_on('r-delayedmatrixstats', type=('build', 'run'))
depends_on('r-beachmat', type=('build', 'run'))
|
