1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
|
# Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from spack.package import *
class RSignac(RPackage):
"""Analysis of Single-Cell Chromatin Data.
A framework for the analysis and exploration of single-cell chromatin data.
The 'Signac' package contains functions for quantifying single-cell
chromatin data, computing per-cell quality control metrics, dimension
reduction and normalization, visualization, and DNA sequence motif
analysis. Reference: Stuart et al. (2021)
<doi:10.1038/s41592-021-01282-5>."""
cran = "Signac"
version('1.7.0', sha256='5e4456eeab29fa2df7f6236b050dec8cb9c073d7652a89ee5030a27f94e5e4bf')
depends_on('r@4.0.0:', type=('build', 'run'))
depends_on('r-genomeinfodb@1.29.3:', type=('build', 'run'))
depends_on('r-genomicranges', type=('build', 'run'))
depends_on('r-iranges', type=('build', 'run'))
depends_on('r-matrix', type=('build', 'run'))
depends_on('r-rsamtools', type=('build', 'run'))
depends_on('r-s4vectors', type=('build', 'run'))
depends_on('r-seuratobject@4.0.0:', type=('build', 'run'))
depends_on('r-data-table', type=('build', 'run'))
depends_on('r-dplyr@1.0.0:', type=('build', 'run'))
depends_on('r-future', type=('build', 'run'))
depends_on('r-future-apply', type=('build', 'run'))
depends_on('r-ggplot2', type=('build', 'run'))
depends_on('r-irlba', type=('build', 'run'))
depends_on('r-pbapply', type=('build', 'run'))
depends_on('r-tidyr', type=('build', 'run'))
depends_on('r-patchwork', type=('build', 'run'))
depends_on('r-biocgenerics', type=('build', 'run'))
depends_on('r-stringi', type=('build', 'run'))
depends_on('r-fastmatch', type=('build', 'run'))
depends_on('r-rcpproll', type=('build', 'run'))
depends_on('r-scales', type=('build', 'run'))
depends_on('r-rcpp', type=('build', 'run'))
depends_on('r-tidyselect', type=('build', 'run'))
depends_on('r-vctrs', type=('build', 'run'))
|
