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# Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from spack.package import *
class RXde(RPackage):
"""a Bayesian hierarchical model for cross-study analysis of
differential gene expression.
Multi-level model for cross-study detection of differential gene
expression."""
bioc = "XDE"
version('2.40.0', commit='bfc3c54787aec97b70bef7b99a6adc75d2cf5ed2')
version('2.36.0', commit='0277f9dffbd7d1880be77cb8581fc614501b3293')
version('2.30.0', commit='058af6f1e431522778f970bf61f834620d3d7dd7')
version('2.28.0', commit='b8cc7d0840ce1324644e8b4a750fbb964884498b')
version('2.26.0', commit='7bf6368037937c53542447175061c2e2059ee3be')
version('2.24.0', commit='fd5f245f82893657dc36e5a67a1d3b8255772462')
version('2.22.0', commit='25bcec965ae42a410dd285a9db9be46d112d8e81')
depends_on('r@2.10.0:', type=('build', 'run'))
depends_on('r-biobase@2.5.5:', type=('build', 'run'))
depends_on('r-biocgenerics', type=('build', 'run'))
depends_on('r-genefilter', type=('build', 'run'))
depends_on('r-gtools', type=('build', 'run'))
depends_on('r-mvtnorm', type=('build', 'run'))
depends_on('r-rcolorbrewer', type=('build', 'run'), when='@2.24.0:')
depends_on('r-genemeta', type=('build', 'run'), when='@2.24.0:')
depends_on('r-siggenes', type=('build', 'run'), when='@2.24.0:')
depends_on('r-mergemaid', type=('build', 'run'), when='@:2.30.0')
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