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# Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from spack.package import *
class RdpClassifier(Package, SourceforgePackage):
"""The RDP Classifier is a naive Bayesian classifier that can rapidly and
accurately provides taxonomic assignments from domain to genus, with
confidence estimates for each assignment. """
homepage = "http://rdp.cme.msu.edu/"
sourceforge_mirror_path = "rdp-classifier/rdp_classifier_2.12.zip"
version('2.12', sha256='977896248189a1ce2146dd3a61d203c3c6bc9aa3982c60332d463832922f7d0a')
depends_on('java', type=('build', 'run'))
def install(self, spec, prefix):
mkdirp(prefix.bin)
install(join_path('dist', 'classifier.jar'), prefix.bin)
install_tree(join_path('dist', 'lib'), prefix.bin.lib)
install(join_path('lib', 'junit-4.8.2.jar'), prefix.bin.lib)
install_tree('src', prefix.src)
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