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# Copyright 2013-2018 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from spack import *
class Stringtie(MakefilePackage):
"""StringTie is a fast and highly efficient assembler of RNA-Seq alignments
into potential transcripts."""
homepage = "https://ccb.jhu.edu/software/stringtie"
url = "https://github.com/gpertea/stringtie/archive/v1.3.3b.tar.gz"
version('1.3.4a', '2a191ef6512242a3a5778cf7718bb6af')
version('1.3.3b', '11a43260b18e4272182380e922445d88')
depends_on('samtools')
def install(self, spec, prefix):
mkdirp(prefix.bin)
install('stringtie', prefix.bin)
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