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|
# Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
import os
import sys
from spack import *
from spack.build_environment import dso_suffix
from spack.error import NoHeadersError
from spack.operating_systems.mac_os import macos_version
from spack.pkg.builtin.boost import Boost
from spack.pkg.builtin.kokkos import Kokkos
# Trilinos is complicated to build, as an inspiration a couple of links to
# other repositories which build it:
# https://github.com/hpcugent/easybuild-easyblocks/blob/master/easybuild/easyblocks/t/trilinos.py#L111
# https://github.com/koecher/candi/blob/master/deal.II-toolchain/packages/trilinos.package
# https://gitlab.com/configurations/cluster-config/blob/master/trilinos.sh
# https://github.com/Homebrew/homebrew-science/blob/master/trilinos.rb and some
# relevant documentation/examples:
# https://github.com/trilinos/Trilinos/issues/175
class Trilinos(CMakePackage, CudaPackage, ROCmPackage):
"""The Trilinos Project is an effort to develop algorithms and enabling
technologies within an object-oriented software framework for the solution
of large-scale, complex multi-physics engineering and scientific problems.
A unique design feature of Trilinos is its focus on packages.
"""
homepage = "https://trilinos.org/"
url = "https://github.com/trilinos/Trilinos/archive/trilinos-release-12-12-1.tar.gz"
git = "https://github.com/trilinos/Trilinos.git"
maintainers = ['keitat', 'sethrj', 'kuberry']
tags = ['e4s']
# ###################### Versions ##########################
version('master', branch='master')
version('develop', branch='develop')
version('13.2.0', commit='4a5f7906a6420ee2f9450367e9cc95b28c00d744') # tag trilinos-release-13-2-0
version('13.0.1', commit='4796b92fb0644ba8c531dd9953e7a4878b05c62d', preferred=True) # tag trilinos-release-13-0-1
version('13.0.0', commit='9fec35276d846a667bc668ff4cbdfd8be0dfea08') # tag trilinos-release-13-0-0
version('12.18.1', commit='55a75997332636a28afc9db1aee4ae46fe8d93e7') # tag trilinos-release-12-8-1
version('12.14.1', sha256='52a4406cca2241f5eea8e166c2950471dd9478ad6741cbb2a7fc8225814616f0')
version('12.12.1', sha256='5474c5329c6309224a7e1726cf6f0d855025b2042959e4e2be2748bd6bb49e18')
version('12.10.1', sha256='ab81d917196ffbc21c4927d42df079dd94c83c1a08bda43fef2dd34d0c1a5512')
version('12.8.1', sha256='d20fe60e31e3ba1ef36edecd88226240a518f50a4d6edcc195b88ee9dda5b4a1')
version('12.6.4', sha256='1c7104ba60ee8cc4ec0458a1c4f6a26130616bae7580a7b15f2771a955818b73')
version('12.6.3', sha256='4d28298bb4074eef522db6cd1626f1a934e3d80f292caf669b8846c0a458fe81')
version('12.6.2', sha256='8be7e3e1166cc05aea7f856cc8033182e8114aeb8f87184cb38873bfb2061779')
version('12.6.1', sha256='4b38ede471bed0036dcb81a116fba8194f7bf1a9330da4e29c3eb507d2db18db')
version('12.4.2', sha256='fd2c12e87a7cedc058bcb8357107ffa2474997aa7b17b8e37225a1f7c32e6f0e')
version('12.2.1', sha256='088f303e0dc00fb4072b895c6ecb4e2a3ad9a2687b9c62153de05832cf242098')
version('12.0.1', sha256='eee7c19ca108538fa1c77a6651b084e06f59d7c3307dae77144136639ab55980')
version('11.14.3', sha256='e37fa5f69103576c89300e14d43ba77ad75998a54731008b25890d39892e6e60')
version('11.14.2', sha256='f22b2b0df7b88e28b992e19044ba72b845292b93cbbb3a948488199647381119')
version('11.14.1', sha256='f10fc0a496bf49427eb6871c80816d6e26822a39177d850cc62cf1484e4eec07')
# ###################### Variants ##########################
# Build options
variant('complex', default=False, description='Enable complex numbers in Trilinos')
variant('cuda_rdc', default=False, description='Turn on RDC for CUDA build')
variant('rocm_rdc', default=False, description='Turn on RDC for ROCm build')
variant('cxxstd', default='14', values=['11', '14', '17'], multi=False)
variant('debug', default=False, description='Enable runtime safety and debug checks')
variant('explicit_template_instantiation', default=True, description='Enable explicit template instantiation (ETI)')
variant('float', default=False, description='Enable single precision (float) numbers in Trilinos')
variant('fortran', default=True, description='Compile with Fortran support')
variant('gotype', default='long_long',
values=('int', 'long', 'long_long', 'all'),
multi=False,
description='global ordinal type for Tpetra')
variant('openmp', default=False, description='Enable OpenMP')
variant('python', default=False, description='Build PyTrilinos wrappers')
variant('shared', default=True, description='Enables the build of shared libraries')
variant('uvm', default=False, when='@13.2: +cuda', description='Turn on UVM for CUDA build')
variant('wrapper', default=False, description='Use nvcc-wrapper for CUDA build')
# TPLs (alphabet order)
variant('adios2', default=False, description='Enable ADIOS2')
variant('boost', default=False, description='Compile with Boost')
variant('hdf5', default=False, description='Compile with HDF5')
variant('hypre', default=False, description='Compile with Hypre preconditioner')
variant('mpi', default=True, description='Compile with MPI parallelism')
variant('mumps', default=False, description='Compile with support for MUMPS solvers')
variant('suite-sparse', default=False, description='Compile with SuiteSparse solvers')
variant('superlu-dist', default=False, description='Compile with SuperluDist solvers')
variant('superlu', default=False, description='Compile with SuperLU solvers')
variant('strumpack', default=False, description='Compile with STRUMPACK solvers')
variant('x11', default=False, description='Compile with X11 when +exodus')
# Package options (alphabet order)
variant('amesos', default=True, description='Compile with Amesos')
variant('amesos2', default=True, description='Compile with Amesos2')
variant('anasazi', default=True, description='Compile with Anasazi')
variant('aztec', default=True, description='Compile with Aztec')
variant('belos', default=True, description='Compile with Belos')
variant('chaco', default=False, description='Compile with Chaco from SEACAS')
variant('epetra', default=True, description='Compile with Epetra')
variant('epetraext', default=True, description='Compile with EpetraExt')
variant('exodus', default=False, description='Compile with Exodus from SEACAS')
variant('ifpack', default=True, description='Compile with Ifpack')
variant('ifpack2', default=True, description='Compile with Ifpack2')
variant('intrepid', default=False, description='Enable Intrepid')
variant('intrepid2', default=False, description='Enable Intrepid2')
variant('isorropia', default=False, description='Compile with Isorropia')
variant('gtest', default=False, description='Build vendored Googletest')
variant('kokkos', default=True, description='Compile with Kokkos')
variant('ml', default=True, description='Compile with ML')
variant('minitensor', default=False, description='Compile with MiniTensor')
variant('muelu', default=True, description='Compile with Muelu')
variant('nox', default=False, description='Compile with NOX')
variant('panzer', default=False, description='Compile with Panzer')
variant('piro', default=False, description='Compile with Piro')
variant('phalanx', default=False, description='Compile with Phalanx')
variant('rol', default=False, description='Compile with ROL')
variant('rythmos', default=False, description='Compile with Rythmos')
variant('sacado', default=True, description='Compile with Sacado')
variant('stk', default=False, description='Compile with STK')
variant('shards', default=False, description='Compile with Shards')
variant('shylu', default=False, description='Compile with ShyLU')
variant('stokhos', default=False, description='Compile with Stokhos')
variant('stratimikos', default=False, description='Compile with Stratimikos')
variant('teko', default=False, description='Compile with Teko')
variant('tempus', default=False, description='Compile with Tempus')
variant('thyra', default=False, description='Compile with Thyra')
variant('tpetra', default=True, description='Compile with Tpetra')
variant('trilinoscouplings', default=False, description='Compile with TrilinosCouplings')
variant('zoltan', default=False, description='Compile with Zoltan')
variant('zoltan2', default=False, description='Compile with Zoltan2')
# Internal package options (alphabetical order)
variant('basker', default=False, description='Compile with the Basker solver in Amesos2')
variant('epetraextbtf', default=False, description='Compile with BTF in EpetraExt')
variant('epetraextexperimental', default=False, description='Compile with experimental in EpetraExt')
variant('epetraextgraphreorderings', default=False, description='Compile with graph reorderings in EpetraExt')
# External package options
variant('dtk', default=False, description='Enable DataTransferKit (deprecated)')
variant('scorec', default=False, description='Enable SCOREC')
variant('mesquite', default=False, description='Enable Mesquite (deprecated)')
resource(name='dtk',
git='https://github.com/ornl-cees/DataTransferKit.git',
commit='4fe4d9d56cfd4f8a61f392b81d8efd0e389ee764', # branch dtk-3.0
placement='DataTransferKit',
when='+dtk @12.14.0:12.14')
resource(name='dtk',
git='https://github.com/ornl-cees/DataTransferKit.git',
commit='edfa050cd46e2274ab0a0b7558caca0079c2e4ca', # tag 3.1-rc1
placement='DataTransferKit',
submodules=True,
when='+dtk @12.18.0:12.18')
resource(name='scorec',
git='https://github.com/SCOREC/core.git',
commit='73c16eae073b179e45ec625a5abe4915bc589af2', # tag v2.2.5
placement='SCOREC',
when='+scorec')
resource(name='mesquite',
url='https://github.com/trilinos/mesquite/archive/trilinos-release-12-12-1.tar.gz',
sha256='e0d09b0939dbd461822477449dca611417316e8e8d8268fd795debb068edcbb5',
placement='packages/mesquite',
when='+mesquite @12.12.1:12.16')
resource(name='mesquite',
git='https://github.com/trilinos/mesquite.git',
commit='20a679679b5cdf15bf573d66c5dc2b016e8b9ca1', # branch trilinos-release-12-12-1
placement='packages/mesquite',
when='+mesquite @12.18.1:12.18')
resource(name='mesquite',
git='https://github.com/trilinos/mesquite.git',
tag='develop',
placement='packages/mesquite',
when='+mesquite @master')
# ###################### Conflicts ##########################
# Epetra stack
with when('~epetra'):
conflicts('+amesos')
conflicts('+aztec')
conflicts('+epetraext')
conflicts('+ifpack')
conflicts('+isorropia')
conflicts('+ml', when='@13.2:')
with when('~epetraext'):
conflicts('+isorropia')
conflicts('+teko')
conflicts('+epetraextbtf')
conflicts('+epetraextexperimental')
conflicts('+epetraextgraphreorderings')
with when('+teko'):
conflicts('~stratimikos')
conflicts('@:12 gotype=long')
with when('+piro'):
conflicts('~stratimikos')
conflicts('~nox')
# Tpetra stack
with when('~kokkos'):
conflicts('+cuda')
conflicts('+rocm')
conflicts('+tpetra')
conflicts('+intrepid2')
conflicts('+phalanx')
with when('~tpetra'):
conflicts('+amesos2')
conflicts('+dtk')
conflicts('+ifpack2')
conflicts('+muelu')
conflicts('+teko')
conflicts('+zoltan2')
with when('~zoltan'):
conflicts('+isorropia')
conflicts('+scorec')
conflicts('+shylu')
conflicts('+zoltan2')
with when('~shards'):
conflicts('+intrepid')
conflicts('+intrepid2')
conflicts('+scorec')
conflicts('+stk')
with when('+scorec'):
conflicts('~mpi')
conflicts('~stk')
# Panzer is not gen-2 library
with when('+panzer'):
conflicts('~intrepid2')
conflicts('~mpi')
conflicts('~phalanx')
conflicts('~sacado')
conflicts('~tpetra')
conflicts('~thyra')
conflicts('~zoltan')
conflicts('~nox')
conflicts('~rythmos')
conflicts('~piro')
conflicts('~stratimikos')
conflicts('~stk')
conflicts('~ml')
conflicts('~ifpack')
conflicts('~aztec')
# Known requirements from tribits dependencies
conflicts('~thyra', when='+stratimikos')
conflicts('+aztec', when='~fortran')
conflicts('+basker', when='~amesos2')
conflicts('+ifpack2', when='~belos')
conflicts('+intrepid', when='~sacado')
conflicts('+minitensor', when='~boost')
conflicts('+phalanx', when='~sacado')
conflicts('+stokhos', when='~kokkos')
conflicts('+tempus', when='~nox')
# Only allow DTK with Trilinos 12.14, 12.18
conflicts('+dtk', when='~boost')
conflicts('+dtk', when='~intrepid2')
conflicts('+dtk', when='@:12.12,13:')
# Installed FindTrilinos are broken in SEACAS if Fortran is disabled
# see https://github.com/trilinos/Trilinos/issues/3346
conflicts('+exodus', when='@:13.0.1 ~fortran')
# Only allow Mesquite with Trilinos 12.12 and up, and master
conflicts('+mesquite', when='@:12.10,master')
# Strumpack is only available as of mid-2021
conflicts('+strumpack', when='@:13.0')
# Can only use one type of SuperLU
conflicts('+superlu-dist', when='+superlu')
# For Trilinos v11 we need to force SuperLUDist=OFF, since only the
# deprecated SuperLUDist v3.3 together with an Amesos patch is working.
conflicts('+superlu-dist', when='@11.4.1:11.14.3')
# see https://github.com/trilinos/Trilinos/issues/3566
conflicts('+superlu-dist', when='+float+amesos2+explicit_template_instantiation^superlu-dist@5.3.0:')
# Amesos, conflicting types of double and complex SLU_D
# see https://trilinos.org/pipermail/trilinos-users/2015-March/004731.html
# and https://trilinos.org/pipermail/trilinos-users/2015-March/004802.html
conflicts('+superlu-dist', when='+complex+amesos2')
# https://github.com/trilinos/Trilinos/issues/2994
conflicts(
'+shared', when='+stk platform=darwin',
msg='Cannot build Trilinos with STK as a shared library on Darwin.'
)
conflicts('+adios2', when='@:12.14.1')
conflicts('cxxstd=11', when='@13.2:')
conflicts('cxxstd=17', when='@:12')
conflicts('cxxstd=11', when='+wrapper ^cuda@6.5.14')
conflicts('cxxstd=14', when='+wrapper ^cuda@6.5.14:8.0.61')
conflicts('cxxstd=17', when='+wrapper ^cuda@6.5.14:10.2.89')
# Multi-value gotype only applies to trilinos through 12.14
conflicts('gotype=all', when='@12.15:')
# CUDA without wrapper requires clang
for _compiler in spack.compilers.supported_compilers():
if _compiler != 'clang':
conflicts('+cuda', when='~wrapper %' + _compiler,
msg='trilinos~wrapper+cuda can only be built with the '
'Clang compiler')
conflicts('+cuda_rdc', when='~cuda')
conflicts('+rocm_rdc', when='~rocm')
conflicts('+wrapper', when='~cuda')
conflicts('+wrapper', when='%clang')
# Old trilinos fails with new CUDA (see #27180)
conflicts('@:13.0.1 +cuda', when='^cuda@11:')
# Build hangs with CUDA 11.6 (see #28439)
conflicts('+cuda +stokhos', when='^cuda@11.6:')
# Cuda UVM must be enabled prior to 13.2
# See https://github.com/spack/spack/issues/28869
conflicts('~uvm', when='@:13.1 +cuda')
# stokhos fails on xl/xl_r
conflicts('+stokhos', when='%xl')
conflicts('+stokhos', when='%xl_r')
# ###################### Dependencies ##########################
depends_on('adios2', when='+adios2')
depends_on('blas')
depends_on('boost', when='+boost')
# Need to revisit the requirement of STK
depends_on('boost', when='+stk')
#
depends_on('cgns', when='+exodus')
# TODO: replace this with an explicit list of components of Boost,
# for instance depends_on('boost +filesystem')
# See https://github.com/spack/spack/pull/22303 for reference
depends_on(Boost.with_default_variants, when='+boost')
depends_on('hdf5+hl', when='+hdf5')
depends_on('hypre~internal-superlu~int64', when='+hypre')
depends_on('kokkos-nvcc-wrapper', when='+wrapper')
depends_on('lapack')
# depends_on('perl', type=('build',)) # TriBITS finds but doesn't use...
depends_on('libx11', when='+x11')
depends_on('matio', when='+exodus')
depends_on('metis', when='+zoltan')
depends_on('mpi', when='+mpi')
depends_on('netcdf-c', when="+exodus")
depends_on('parallel-netcdf', when='+exodus+mpi')
depends_on('parmetis', when='+mpi +zoltan')
depends_on('parmetis', when='+scorec')
depends_on('py-mpi4py', when='+mpi+python', type=('build', 'run'))
depends_on('py-numpy', when='+python', type=('build', 'run'))
depends_on('python', when='+python')
depends_on('python', when='@13.2: +ifpack +hypre', type='build')
depends_on('python', when='@13.2: +ifpack2 +hypre', type='build')
depends_on('scalapack', when='+mumps')
depends_on('scalapack', when='+strumpack+mpi')
depends_on('strumpack+shared', when='+strumpack')
depends_on('suite-sparse', when='+suite-sparse')
depends_on('superlu-dist', when='+superlu-dist')
depends_on('superlu@4.3 +pic', when='+superlu')
depends_on('swig', when='+python')
depends_on('zlib', when='+zoltan')
# Trilinos' Tribits config system is limited which makes it very tricky to
# link Amesos with static MUMPS, see
# https://trilinos.org/docs/dev/packages/amesos2/doc/html/classAmesos2_1_1MUMPS.html
# One could work it out by getting linking flags from mpif90 --showme:link
# (or alike) and adding results to -DTrilinos_EXTRA_LINK_FLAGS together
# with Blas and Lapack and ScaLAPACK and Blacs and -lgfortran and it may
# work at the end. But let's avoid all this by simply using shared libs
depends_on('mumps@5.0:+shared', when='+mumps')
for _flag in ('~mpi', '+mpi'):
depends_on('hdf5' + _flag, when='+hdf5' + _flag)
depends_on('mumps' + _flag, when='+mumps' + _flag)
for _flag in ('~openmp', '+openmp'):
depends_on('mumps' + _flag, when='+mumps' + _flag)
depends_on('hwloc', when='@13: +kokkos')
depends_on('hwloc+cuda', when='@13: +kokkos+cuda')
depends_on('hypre@develop', when='@master: +hypre')
depends_on('netcdf-c+mpi+parallel-netcdf', when="+exodus+mpi@12.12.1:")
depends_on('superlu-dist@4.4:5.3', when='@12.6.2:12.12.1+superlu-dist')
depends_on('superlu-dist@5.4:6.2.0', when='@12.12.2:13.0.0+superlu-dist')
depends_on('superlu-dist@6.3.0:', when='@13.0.1:99 +superlu-dist')
depends_on('superlu-dist@:4.3', when='@11.14.1:12.6.1+superlu-dist')
depends_on('superlu-dist@develop', when='@master: +superlu-dist')
# ###################### Patches ##########################
patch('umfpack_from_suitesparse.patch', when='@11.14.1:12.8.1')
for _compiler in ['xl', 'xl_r', 'clang']:
patch('xlf_seacas.patch', when='@12.10.1:12.12.1 %' + _compiler)
patch('xlf_tpetra.patch', when='@12.12.1 %' + _compiler)
patch('fix_clang_errors_12_18_1.patch', when='@12.18.1%clang')
patch('cray_secas_12_12_1.patch', when='@12.12.1%cce')
patch('cray_secas.patch', when='@12.14.1:12%cce')
# workaround an NVCC bug with c++14 (https://github.com/trilinos/Trilinos/issues/6954)
# avoid calling deprecated functions with CUDA-11
patch('fix_cxx14_cuda11.patch', when='@13.0.0:13.0.1 cxxstd=14 ^cuda@11:')
# Allow building with +teko gotype=long
patch('https://github.com/trilinos/Trilinos/commit/b17f20a0b91e0b9fc5b1b0af3c8a34e2a4874f3f.patch?full_index=1',
sha256='063a38f402439fa39fd8d57315a321e6510adcd04aec5400a88e744aaa60bc8e',
when='@13.0.0:13.0.1 +teko gotype=long')
def flag_handler(self, name, flags):
is_cce = self.spec.satisfies('%cce')
spec = self.spec
if name == 'cxxflags':
if '+mumps' in spec:
# see https://github.com/trilinos/Trilinos/blob/master/packages/amesos/README-MUMPS
flags.append('-DMUMPS_5_0')
if '+stk platform=darwin' in spec:
flags.append('-DSTK_NO_BOOST_STACKTRACE')
if '+stk%intel' in spec:
# Workaround for Intel compiler segfaults with STK and IPO
flags.append('-no-ipo')
if '+wrapper' in spec:
flags.append('--expt-extended-lambda')
elif name == 'ldflags':
if is_cce:
flags.append('-fuse-ld=gold')
if spec.satisfies('platform=linux ~cuda'):
# TriBITS explicitly links libraries against all transitive
# dependencies, leading to O(N^2) library resolution. When
# CUDA is enabled (possibly only with MPI as well) the linker
# flag does not propagate correctly.
flags.append('-Wl,--as-needed')
elif spec.satisfies('+stk +shared platform=darwin'):
flags.append('-Wl,-undefined,dynamic_lookup')
if is_cce:
return (None, None, flags)
return (flags, None, None)
def url_for_version(self, version):
url = "https://github.com/trilinos/Trilinos/archive/trilinos-release-{0}.tar.gz"
return url.format(version.dashed)
def setup_dependent_run_environment(self, env, dependent_spec):
if '+cuda' in self.spec:
# currently Trilinos doesn't perform the memory fence so
# it relies on blocking CUDA kernel launch. This is needed
# in case the dependent app also run a CUDA backend via Trilinos
env.set('CUDA_LAUNCH_BLOCKING', '1')
def setup_dependent_package(self, module, dependent_spec):
if '+wrapper' in self.spec:
self.spec.kokkos_cxx = self.spec["kokkos-nvcc-wrapper"].kokkos_cxx
else:
self.spec.kokkos_cxx = spack_cxx
def setup_build_environment(self, env):
spec = self.spec
if '+cuda' in spec and '+wrapper' in spec:
if '+mpi' in spec:
env.set('OMPI_CXX', spec["kokkos-nvcc-wrapper"].kokkos_cxx)
env.set('MPICH_CXX', spec["kokkos-nvcc-wrapper"].kokkos_cxx)
env.set('MPICXX_CXX', spec["kokkos-nvcc-wrapper"].kokkos_cxx)
else:
env.set('CXX', spec["kokkos-nvcc-wrapper"].kokkos_cxx)
if '+rocm' in spec:
if '+mpi' in spec:
env.set('OMPI_CXX', self.spec['hip'].hipcc)
env.set('MPICH_CXX', self.spec['hip'].hipcc)
env.set('MPICXX_CXX', self.spec['hip'].hipcc)
else:
env.set('CXX', self.spec['hip'].hipcc)
if '+stk' in spec:
# Using CXXFLAGS for hipcc which doesn't use flags in the spack wrappers
env.set('CXXFLAGS', '-DSTK_NO_BOOST_STACKTRACE')
def cmake_args(self):
options = []
spec = self.spec
define = CMakePackage.define
define_from_variant = self.define_from_variant
def _make_definer(prefix):
def define_enable(suffix, value=None):
key = prefix + suffix
if value is None:
# Default to lower-case spec
value = suffix.lower()
elif isinstance(value, bool):
# Explicit true/false
return define(key, value)
return define_from_variant(key, value)
return define_enable
# Return "Trilinos_ENABLE_XXX" for spec "+xxx" or boolean value
define_trilinos_enable = _make_definer("Trilinos_ENABLE_")
# Same but for TPLs
define_tpl_enable = _make_definer("TPL_ENABLE_")
# #################### Base Settings #######################
options.extend([
define('Trilinos_VERBOSE_CONFIGURE', False),
define_from_variant('BUILD_SHARED_LIBS', 'shared'),
define_trilinos_enable('ALL_OPTIONAL_PACKAGES', False),
define_trilinos_enable('ALL_PACKAGES', False),
define_trilinos_enable('CXX11', True),
define_trilinos_enable('DEBUG', 'debug'),
define_trilinos_enable('EXAMPLES', False),
define_trilinos_enable('SECONDARY_TESTED_CODE', True),
define_trilinos_enable('TESTS', False),
define_trilinos_enable('Fortran'),
define_trilinos_enable('OpenMP'),
define_trilinos_enable('EXPLICIT_INSTANTIATION',
'explicit_template_instantiation')
])
if spec.version >= Version('13'):
options.append(define_from_variant('CMAKE_CXX_STANDARD', 'cxxstd'))
else:
# Prior to version 13, Trilinos would erroneously inject
# '-std=c++11' regardless of CMAKE_CXX_STANDARD value
options.append(define(
'Trilinos_CXX11_FLAGS',
self.compiler.cxx14_flag
if spec.variants['cxxstd'].value == '14'
else self.compiler.cxx11_flag
))
# ################## Trilinos Packages #####################
options.extend([
define_trilinos_enable('Amesos'),
define_trilinos_enable('Amesos2'),
define_trilinos_enable('Anasazi'),
define_trilinos_enable('AztecOO', 'aztec'),
define_trilinos_enable('Belos'),
define_trilinos_enable('Epetra'),
define_trilinos_enable('EpetraExt'),
define_trilinos_enable('FEI', False),
define_trilinos_enable('Gtest'),
define_trilinos_enable('Ifpack'),
define_trilinos_enable('Ifpack2'),
define_trilinos_enable('Intrepid'),
define_trilinos_enable('Intrepid2'),
define_trilinos_enable('Isorropia'),
define_trilinos_enable('Kokkos'),
define_trilinos_enable('MiniTensor'),
define_trilinos_enable('Mesquite'),
define_trilinos_enable('ML'),
define_trilinos_enable('MueLu'),
define_trilinos_enable('NOX'),
define_trilinos_enable('Pamgen', False),
define_trilinos_enable('Panzer'),
define_trilinos_enable('Pike', False),
define_trilinos_enable('Piro'),
define_trilinos_enable('Phalanx'),
define_trilinos_enable('PyTrilinos', 'python'),
define_trilinos_enable('ROL'),
define_trilinos_enable('Rythmos'),
define_trilinos_enable('Sacado'),
define_trilinos_enable('SCOREC'),
define_trilinos_enable('Shards'),
define_trilinos_enable('ShyLU'),
define_trilinos_enable('STK'),
define_trilinos_enable('Stokhos'),
define_trilinos_enable('Stratimikos'),
define_trilinos_enable('Teko'),
define_trilinos_enable('Tempus'),
define_trilinos_enable('Thyra'),
define_trilinos_enable('Tpetra'),
define_trilinos_enable('TrilinosCouplings'),
define_trilinos_enable('Zoltan'),
define_trilinos_enable('Zoltan2'),
define_from_variant('EpetraExt_BUILD_BTF', 'epetraextbtf'),
define_from_variant('EpetraExt_BUILD_EXPERIMENTAL',
'epetraextexperimental'),
define_from_variant('EpetraExt_BUILD_GRAPH_REORDERINGS',
'epetraextgraphreorderings'),
define_from_variant('Amesos2_ENABLE_Basker', 'basker'),
define_from_variant('Amesos2_ENABLE_LAPACK', 'amesos2'),
])
if '+dtk' in spec:
options.extend([
define('Trilinos_EXTRA_REPOSITORIES', 'DataTransferKit'),
define_trilinos_enable('DataTransferKit', True),
])
if '+exodus' in spec:
options.extend([
define_trilinos_enable('SEACAS', True),
define_trilinos_enable('SEACASExodus', True),
define_trilinos_enable('SEACASIoss', True),
define_trilinos_enable('SEACASEpu', True),
define_trilinos_enable('SEACASExodiff', True),
define_trilinos_enable('SEACASNemspread', True),
define_trilinos_enable('SEACASNemslice', True),
])
else:
options.extend([
define_trilinos_enable('SEACASExodus', False),
define_trilinos_enable('SEACASIoss', False),
])
if '+chaco' in spec:
options.extend([
define_trilinos_enable('SEACAS', True),
define_trilinos_enable('SEACASChaco', True),
])
else:
# don't disable SEACAS, could be needed elsewhere
options.extend([
define_trilinos_enable('SEACASChaco', False),
define_trilinos_enable('SEACASNemslice', False)
])
if '+stratimikos' in spec:
# Explicitly enable Thyra (ThyraCore is required). If you don't do
# this, then you get "NOT setting ${pkg}_ENABLE_Thyra=ON since
# Thyra is NOT enabled at this point!" leading to eventual build
# errors if using MueLu because `Xpetra_ENABLE_Thyra` is set to
# off.
# Add thyra adapters based on package enables
options.extend(
define_trilinos_enable('Thyra' + pkg + 'Adapters', pkg.lower())
for pkg in ['Epetra', 'EpetraExt', 'Tpetra'])
# ######################### TPLs #############################
def define_tpl(trilinos_name, spack_name, have_dep):
options.append(define('TPL_ENABLE_' + trilinos_name, have_dep))
if not have_dep:
return
depspec = spec[spack_name]
libs = depspec.libs
try:
options.extend([
define(trilinos_name + '_INCLUDE_DIRS',
depspec.headers.directories),
])
except NoHeadersError:
# Handle case were depspec does not have headers
pass
options.extend([
define(trilinos_name + '_ROOT', depspec.prefix),
define(trilinos_name + '_LIBRARY_NAMES', libs.names),
define(trilinos_name + '_LIBRARY_DIRS', libs.directories),
])
# Enable these TPLs explicitly from variant options.
# Format is (TPL name, variant name, Spack spec name)
tpl_variant_map = [
('ADIOS2', 'adios2', 'adios2'),
('Boost', 'boost', 'boost'),
('CUDA', 'cuda', 'cuda'),
('HDF5', 'hdf5', 'hdf5'),
('HYPRE', 'hypre', 'hypre'),
('MUMPS', 'mumps', 'mumps'),
('UMFPACK', 'suite-sparse', 'suite-sparse'),
('SuperLU', 'superlu', 'superlu'),
('SuperLUDist', 'superlu-dist', 'superlu-dist'),
('X11', 'x11', 'libx11'),
]
if spec.satisfies('@13.0.2:'):
tpl_variant_map.append(('STRUMPACK', 'strumpack', 'strumpack'))
for tpl_name, var_name, spec_name in tpl_variant_map:
define_tpl(tpl_name, spec_name, spec.variants[var_name].value)
# Enable these TPLs based on whether they're in our spec; prefer to
# require this way so that packages/features disable availability
tpl_dep_map = [
('BLAS', 'blas'),
('CGNS', 'cgns'),
('LAPACK', 'lapack'),
('Matio', 'matio'),
('METIS', 'metis'),
('Netcdf', 'netcdf-c'),
('SCALAPACK', 'scalapack'),
('Zlib', 'zlib'),
]
if spec.satisfies('@12.12.1:'):
tpl_dep_map.append(('Pnetcdf', 'parallel-netcdf'))
if spec.satisfies('@13:'):
tpl_dep_map.append(('HWLOC', 'hwloc'))
for tpl_name, dep_name in tpl_dep_map:
define_tpl(tpl_name, dep_name, dep_name in spec)
# MPI settings
options.append(define_tpl_enable('MPI'))
if '+mpi' in spec:
# Force Trilinos to use the MPI wrappers instead of raw compilers
# to propagate library link flags for linkers that require fully
# resolved symbols in shared libs (such as macOS and some newer
# Ubuntu)
options.extend([
define('CMAKE_C_COMPILER', spec['mpi'].mpicc),
define('CMAKE_CXX_COMPILER', spec['mpi'].mpicxx),
define('CMAKE_Fortran_COMPILER', spec['mpi'].mpifc),
define('MPI_BASE_DIR', spec['mpi'].prefix),
])
# ParMETIS dependencies have to be transitive explicitly
have_parmetis = 'parmetis' in spec
options.append(define_tpl_enable('ParMETIS', have_parmetis))
if have_parmetis:
options.extend([
define('ParMETIS_LIBRARY_DIRS', [
spec['parmetis'].prefix.lib, spec['metis'].prefix.lib
]),
define('ParMETIS_LIBRARY_NAMES', ['parmetis', 'metis']),
define('TPL_ParMETIS_INCLUDE_DIRS',
spec['parmetis'].headers.directories +
spec['metis'].headers.directories),
])
if spec.satisfies('^superlu-dist@4.0:'):
options.extend([
define('HAVE_SUPERLUDIST_LUSTRUCTINIT_2ARG', True),
])
if spec.satisfies('^parallel-netcdf'):
options.extend([
define('TPL_Netcdf_Enables_Netcdf4', True),
define('TPL_Netcdf_PARALLEL', True),
define('PNetCDF_ROOT', spec['parallel-netcdf'].prefix),
])
options.append(define_tpl_enable('Cholmod', False))
if spec.satisfies('platform=darwin'):
# Don't let TriBITS define `libdl` as an absolute path to
# the MacOSX{nn.n}.sdk since that breaks at every xcode update
options.append(define_tpl_enable('DLlib', False))
# ################# Explicit template instantiation #################
complex_s = spec.variants['complex'].value
float_s = spec.variants['float'].value
options.extend([
define('Teuchos_ENABLE_COMPLEX', complex_s),
define('Teuchos_ENABLE_FLOAT', float_s),
])
if '+tpetra +explicit_template_instantiation' in spec:
options.append(define_from_variant('Tpetra_INST_OPENMP', 'openmp'))
options.extend([
define('Tpetra_INST_DOUBLE', True),
define('Tpetra_INST_COMPLEX_DOUBLE', complex_s),
define('Tpetra_INST_COMPLEX_FLOAT', float_s and complex_s),
define('Tpetra_INST_FLOAT', float_s),
define('Tpetra_INST_SERIAL', True),
])
gotype = spec.variants['gotype'].value
if gotype == 'all':
# default in older Trilinos versions to enable multiple GOs
options.extend([
define('Tpetra_INST_INT_INT', True),
define('Tpetra_INST_INT_LONG', True),
define('Tpetra_INST_INT_LONG_LONG', True),
])
else:
options.extend([
define('Tpetra_INST_INT_INT', gotype == 'int'),
define('Tpetra_INST_INT_LONG', gotype == 'long'),
define('Tpetra_INST_INT_LONG_LONG', gotype == 'long_long'),
])
# ################# Kokkos ######################
if '+kokkos' in spec:
arch = Kokkos.get_microarch(spec.target)
if arch:
options.append(define("Kokkos_ARCH_" + arch.upper(), True))
define_kok_enable = _make_definer("Kokkos_ENABLE_")
options.extend([
define_kok_enable('CUDA'),
define_kok_enable('OPENMP' if spec.version >= Version('13')
else 'OpenMP'),
])
if '+cuda' in spec:
use_uvm = '+uvm' in spec
options.extend([
define_kok_enable('CUDA_UVM', use_uvm),
define_kok_enable('CUDA_LAMBDA', True),
define_kok_enable('CUDA_RELOCATABLE_DEVICE_CODE', 'cuda_rdc')
])
arch_map = Kokkos.spack_cuda_arch_map
options.extend(
define("Kokkos_ARCH_" + arch_map[arch].upper(), True)
for arch in spec.variants['cuda_arch'].value
)
if '+rocm' in spec:
options.extend([
define_kok_enable('ROCM', False),
define_kok_enable('HIP', True),
define_kok_enable('HIP_RELOCATABLE_DEVICE_CODE', 'rocm_rdc')
])
if '+tpetra' in spec:
options.append(define('Tpetra_INST_HIP', True))
amdgpu_arch_map = Kokkos.amdgpu_arch_map
for amd_target in spec.variants['amdgpu_target'].value:
try:
arch = amdgpu_arch_map[amd_target]
except KeyError:
pass
else:
options.append(define("Kokkos_ARCH_" + arch.upper(), True))
# ################# System-specific ######################
# Fortran lib (assumes clang is built with gfortran!)
if ('+fortran' in spec
and spec.compiler.name in ['gcc', 'clang', 'apple-clang']):
fc = Executable(spec['mpi'].mpifc) if (
'+mpi' in spec) else Executable(spack_fc)
libgfortran = fc('--print-file-name',
'libgfortran.' + dso_suffix,
output=str).strip()
# if libgfortran is equal to "libgfortran.<dso_suffix>" then
# print-file-name failed, use static library instead
if libgfortran == 'libgfortran.' + dso_suffix:
libgfortran = fc('--print-file-name',
'libgfortran.a',
output=str).strip()
# -L<libdir> -lgfortran required for OSX
# https://github.com/spack/spack/pull/25823#issuecomment-917231118
options.append(
define('Trilinos_EXTRA_LINK_FLAGS',
'-L%s/ -lgfortran' % os.path.dirname(libgfortran)))
if sys.platform == 'darwin' and macos_version() >= Version('10.12'):
# use @rpath on Sierra due to limit of dynamic loader
options.append(define('CMAKE_MACOSX_RPATH', True))
else:
options.append(define('CMAKE_INSTALL_NAME_DIR', self.prefix.lib))
return options
@run_after('install')
def filter_python(self):
# When trilinos is built with Python, libpytrilinos is included
# through cmake configure files. Namely, Trilinos_LIBRARIES in
# TrilinosConfig.cmake contains pytrilinos. This leads to a
# run-time error: Symbol not found: _PyBool_Type and prevents
# Trilinos to be used in any C++ code, which links executable
# against the libraries listed in Trilinos_LIBRARIES. See
# https://github.com/trilinos/Trilinos/issues/569 and
# https://github.com/trilinos/Trilinos/issues/866
# A workaround is to remove PyTrilinos from the COMPONENTS_LIST
# and to remove -lpytrilonos from Makefile.export.Trilinos
if '+python' in self.spec:
filter_file(r'(SET\(COMPONENTS_LIST.*)(PyTrilinos;)(.*)',
(r'\1\3'),
'%s/cmake/Trilinos/TrilinosConfig.cmake' %
self.prefix.lib)
filter_file(r'-lpytrilinos', '',
'%s/Makefile.export.Trilinos' %
self.prefix.include)
def setup_run_environment(self, env):
if '+exodus' in self.spec:
env.prepend_path('PYTHONPATH', self.prefix.lib)
if '+cuda' in self.spec:
# currently Trilinos doesn't perform the memory fence so
# it relies on blocking CUDA kernel launch.
env.set('CUDA_LAUNCH_BLOCKING', '1')
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