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# Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from spack import *
class Uqtk(CMakePackage):
"""Sandia Uncertainty Quantification Toolkit. The UQ Toolkit (UQTk) is a
collection of libraries and tools for the quantification of uncertainty
in numerical model predictions"""
homepage = "https://www.sandia.gov/UQToolkit/"
url = "https://github.com/sandialabs/UQTk/archive/v3.0.4.tar.gz"
git = "https://github.com/sandialabs/UQTk.git"
version('master', branch='master')
version('3.1.0', sha256='56ecd3d13bdd908d568e9560dc52cc0f66d7bdcdbe64ab2dd0147a7cf1734f97')
version('3.0.4', sha256='0a72856438134bb571fd328d1d30ce3d0d7aead32eda9b7fb6e436a27d546d2e')
variant('pyuqtk', default=True,
description='Compile Python scripts and interface to C++ libraries')
depends_on('expat')
depends_on('sundials', when='@3.1.0:')
depends_on('blas', when='@3.1.0:')
depends_on('lapack', when='@3.1.0:')
extends('python', when='+pyuqtk')
depends_on('py-numpy', when='+pyuqtk')
depends_on('py-scipy', when='+pyuqtk')
depends_on('py-matplotlib', when='+pyuqtk')
depends_on('py-pymc3', when='+pyuqtk')
depends_on('swig', when='+pyuqtk')
# Modify the process of directly specifying blas/lapack
# as the library name.
patch('remove_unique_libname.patch', when='@3.1.0:')
# Do not link the gfortran library when using the Fujitsu compiler.
patch('not_link_gfortran.patch', when='@3.1.0:%fj')
@when('@3.1.0:')
def cmake_args(self):
spec = self.spec
# Make sure we use Spack's blas/lapack:
lapack_libs = spec['lapack'].libs.joined(';')
blas_libs = spec['blas'].libs.joined(';')
args = [
self.define('CMAKE_SUNDIALS_DIR', spec['sundials'].prefix),
self.define('LAPACK_LIBRARIES', lapack_libs),
self.define('BLAS_LIBRARIES', blas_libs),
self.define_from_variant('PyUQTk', 'pyuqtk')
]
return args
def setup_run_environment(self, env):
if '+pyuqtk' in self.spec:
env.prepend_path('PYTHONPATH', self.prefix)
env.prepend_path('PYTHONPATH', '{0}/PyUQTk'.format(self.prefix))
env.prepend_path('LD_LIBRARY_PATH', '{0}/PyUQTk/'.format(self.prefix))
env.set('UQTK_SRC', self.prefix)
env.set('UQTK_INS', self.prefix)
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