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| author | Audrey Thoma <las_thoma15@iastate.edu> | 2017-08-10 20:04:10 -0500 |
|---|---|---|
| committer | Adam J. Stewart <ajstewart426@gmail.com> | 2017-08-10 20:04:10 -0500 |
| commit | 637f72a8fed04ce92a7fe983496a39eed3e6c17a (patch) | |
| tree | 1a2ab5f7049627814b26af7372b4c6ed83d816d8 | |
| parent | 967370aa0b5a673403aca53cd12837c12b693e1c (diff) | |
| download | spack-637f72a8fed04ce92a7fe983496a39eed3e6c17a.tar.gz spack-637f72a8fed04ce92a7fe983496a39eed3e6c17a.tar.bz2 spack-637f72a8fed04ce92a7fe983496a39eed3e6c17a.tar.xz spack-637f72a8fed04ce92a7fe983496a39eed3e6c17a.zip | |
fimpute: new package (#5060)
| -rw-r--r-- | var/spack/repos/builtin/packages/fimpute/package.py | 40 |
1 files changed, 40 insertions, 0 deletions
diff --git a/var/spack/repos/builtin/packages/fimpute/package.py b/var/spack/repos/builtin/packages/fimpute/package.py new file mode 100644 index 0000000000..bc18419923 --- /dev/null +++ b/var/spack/repos/builtin/packages/fimpute/package.py @@ -0,0 +1,40 @@ +############################################################################## +# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC. +# Produced at the Lawrence Livermore National Laboratory. +# +# This file is part of Spack. +# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved. +# LLNL-CODE-647188 +# +# For details, see https://github.com/llnl/spack +# Please also see the NOTICE and LICENSE files for our notice and the LGPL. +# +# This program is free software; you can redistribute it and/or modify +# it under the terms of the GNU Lesser General Public License (as +# published by the Free Software Foundation) version 2.1, February 1999. +# +# This program is distributed in the hope that it will be useful, but +# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and +# conditions of the GNU Lesser General Public License for more details. +# +# You should have received a copy of the GNU Lesser General Public +# License along with this program; if not, write to the Free Software +# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA +############################################################################## +from spack import * + + +class Fimpute(Package): + """FImpute uses an overlapping sliding window approach to efficiently + exploit relationships or haplotype similarities between target and + reference individuals.""" + + homepage = "http://www.aps.uoguelph.ca/~msargol/fimpute/" + url = "http://www.aps.uoguelph.ca/~msargol/fimpute/FImpute_Linux.zip" + + version('2014-01', 'df934a25c76dabef7d7afcb5b8058d98') + + def install(self, spec, prefix): + mkdirp(prefix.bin) + install('FImpute', prefix.bin) |