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authorGlenn Johnson <glenn-johnson@uiowa.edu>2021-04-20 04:36:08 -0500
committerGitHub <noreply@github.com>2021-04-20 11:36:08 +0200
commit89838bae1d1ad68959b9b5f473aaf78b41190cf3 (patch)
tree39590d969dbbbcc24c533a25e979bb7d69a9d0d5
parent7b54389e12a9455460c77ea10722e4843cd09ef7 (diff)
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r-champdata: new package (#23093)
-rw-r--r--var/spack/repos/builtin/packages/r-champdata/package.py21
1 files changed, 21 insertions, 0 deletions
diff --git a/var/spack/repos/builtin/packages/r-champdata/package.py b/var/spack/repos/builtin/packages/r-champdata/package.py
new file mode 100644
index 0000000000..261463286d
--- /dev/null
+++ b/var/spack/repos/builtin/packages/r-champdata/package.py
@@ -0,0 +1,21 @@
+# Copyright 2013-2021 Lawrence Livermore National Security, LLC and other
+# Spack Project Developers. See the top-level COPYRIGHT file for details.
+#
+# SPDX-License-Identifier: (Apache-2.0 OR MIT)
+
+from spack import *
+
+
+class RChampdata(RPackage):
+ """Packages for ChAMP package:
+
+ Provides datasets needed for ChAMP including a test dataset and blood
+ controls for CNA analysis."""
+
+ bioc = "ChAMPdata"
+
+ version('2.22.0', commit='eeedd4c477fac79f00743da8ff7da064221c5f3d')
+
+ depends_on('r@3.3:', type=('build', 'run'))
+ depends_on('r-genomicranges@1.22.4:', type=('build', 'run'))
+ depends_on('r-biocgenerics@0.16.1:', type=('build', 'run'))