openPMD-api (#7765)

* openPMD-api

Add a new package for openPMD-api.

openPMD is a meta-data standard (markup, schema) for hierarchical,
scientific particle and mesh based data.

openPMD-api is a library wrapping the underlying backends (HDF5,
ADIOS, ...) into a single, object-aware API.

* Repository: https://github.com/openPMD/openPMD-api
* Project: https://github.com/openPMD http://www.openPMD.org

* mpi variant forwarding: fix concretization

1 files changed, 102 insertions, 0 deletions

diff --git a/var/spack/repos/builtin/packages/openpmd-api/package.py b/var/spack/repos/builtin/packages/openpmd-api/package.py
new file mode 100644
index 0000000000..e9aae9308f
--- /dev/null
+++ b/var/spack/repos/builtin/packages/openpmd-api/package.py
@@ -0,0 +1,102 @@
+##############################################################################
+# Copyright (c) 2013-2018, Lawrence Livermore National Security, LLC.
+# Produced at the Lawrence Livermore National Laboratory.
+#
+# This file is part of Spack.
+# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
+# LLNL-CODE-647188
+#
+# For details, see https://github.com/spack/spack
+# Please also see the NOTICE and LICENSE files for our notice and the LGPL.
+#
+# This program is free software; you can redistribute it and/or modify
+# it under the terms of the GNU Lesser General Public License (as
+# published by the Free Software Foundation) version 2.1, February 1999.
+#
+# This program is distributed in the hope that it will be useful, but
+# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
+# conditions of the GNU Lesser General Public License for more details.
+#
+# You should have received a copy of the GNU Lesser General Public
+# License along with this program; if not, write to the Free Software
+# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
+##############################################################################
+from spack import *
+
+
+class OpenpmdApi(CMakePackage):
+    """API for easy reading and writing of openPMD files"""
+
+    homepage = "http://www.openPMD.org"
+    url      = "https://github.com/openPMD/openPMD-api/archive/1.0.0.tar.gz"
+    maintainers = ['ax3l']
+
+    version('develop', branch='dev',
+            git='https://github.com/openPMD/openPMD-api.git')
+
+    variant('mpi', default=True,
+            description='Enable parallel I/O')
+    variant('hdf5', default=True,
+            description='Enable HDF5 support')
+    variant('adios1', default=False,
+            description='Enable ADIOS1 support')
+    variant('adios2', default=False,
+            description='Enable ADIOS2 support')
+    # variant('json', default=True,
+    #         description='Enable JSON support')
+    variant('python', default=True,
+            description='Enable Python bindings')
+    variant('test', default=True,
+            description='Build the tests')
+
+    depends_on('cmake@3.10.0:', type='build')
+    depends_on('boost@1.62.0:')
+    depends_on('mpark-variant@1.3.0:')
+    depends_on('catch@2.2.1: ~single_header', when='+test', type='build')
+    depends_on('mpi@2.3:', when='+mpi')  # might become MPI 3.0+
+    depends_on('hdf5@1.8.6:', when='+hdf5')
+    depends_on('hdf5@1.8.6: ~mpi', when='~mpi +hdf5')
+    depends_on('hdf5@1.8.6: +mpi', when='+mpi +hdf5')
+    depends_on('adios@1.10.0:', when='+adios1')
+    depends_on('adios@1.10.0: ~mpi', when='~mpi +adios1')
+    depends_on('adios@1.10.0: +mpi', when='+mpi +adios1')
+    depends_on('adios2@2.1.0:', when='+adios2')
+    depends_on('adios2@2.1.0: ~mpi', when='~mpi +adios2')
+    depends_on('adios2@2.1.0: +mpi', when='+mpi +adios2')
+    # ideally we want 2.3.0+ for full C++11 CT function signature support
+    depends_on('py-pybind11@2.2.1:', when='+python')
+
+    extends('python', when='+python')
+
+    def cmake_args(self):
+        spec = self.spec
+
+        args = [
+            # variants
+            '-DopenPMD_USE_MPI:BOOL={0}'.format(
+                'ON' if '+mpi' in spec else 'OFF'),
+            '-DopenPMD_USE_HDF5:BOOL={0}'.format(
+                'ON' if '+hdf5' in spec else 'OFF'),
+            '-DopenPMD_USE_ADIOS1:BOOL={0}'.format(
+                'ON' if '+adios1' in spec else 'OFF'),
+            '-DopenPMD_USE_ADIOS2:BOOL={0}'.format(
+                'ON' if '+adios2' in spec else 'OFF'),
+            # '-DopenPMD_USE_JSON:BOOL={0}'.format(
+            #     'ON' if '+json' in spec else 'OFF'),
+            '-DopenPMD_USE_PYTHON:BOOL={0}'.format(
+                'ON' if '+python' in spec else 'OFF'),
+            '-DBUILD_TESTING:BOOL={0}'.format(
+                'ON' if '+test' in spec else 'OFF')
+        ]
+
+        if spec.satisfies('+python'):
+            args.append('-DPYTHON_EXECUTABLE:FILEPATH={0}'.format(
+                        self.spec['python'].command.path))
+
+        # switch internally shipped third-party libraries for spack
+        args.append('-DopenPMD_USE_INTERNAL_VARIANT:BOOL=OFF')
+        if spec.satisfies('+test'):
+            args.append('-DopenPMD_USE_INTERNAL_CATCH:BOOL=OFF')
+
+        return args