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authorlingnanyuan <1297162327@qq.com>2017-10-24 04:12:47 -0500
committerTodd Gamblin <tgamblin@llnl.gov>2017-10-24 11:12:47 +0200
commit2c5b3a22683acd617e27d8260c72944b40582625 (patch)
tree799f86f2d879f13a05dff5444f5f5824e1fe21b2
parent6fd0030acb7ca1e33864a69e505457821d6af83a (diff)
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r-affypdnn: Create new package. (#5826)
-rw-r--r--var/spack/repos/builtin/packages/r-affypdnn/package.py38
1 files changed, 38 insertions, 0 deletions
diff --git a/var/spack/repos/builtin/packages/r-affypdnn/package.py b/var/spack/repos/builtin/packages/r-affypdnn/package.py
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index 0000000000..df941eaebe
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+++ b/var/spack/repos/builtin/packages/r-affypdnn/package.py
@@ -0,0 +1,38 @@
+##############################################################################
+# Copyright (c) 2013-2017, Lawrence Livermore National Security, LLC.
+# Produced at the Lawrence Livermore National Laboratory.
+#
+# This file is part of Spack.
+# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
+# LLNL-CODE-647188
+#
+# For details, see https://github.com/llnl/spack
+# Please also see the NOTICE and LICENSE files for our notice and the LGPL.
+#
+# This program is free software; you can redistribute it and/or modify
+# it under the terms of the GNU Lesser General Public License (as
+# published by the Free Software Foundation) version 2.1, February 1999.
+#
+# This program is distributed in the hope that it will be useful, but
+# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
+# conditions of the GNU Lesser General Public License for more details.
+#
+# You should have received a copy of the GNU Lesser General Public
+# License along with this program; if not, write to the Free Software
+# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
+##############################################################################
+from spack import *
+
+
+class RAffypdnn(RPackage):
+ """The package contains functions to perform the PDNN method
+ described by Li Zhang et al."""
+
+ homepage = "https://www.bioconductor.org/packages/affypdnn/"
+ url = "https://git.bioconductor.org/packages/affypdnn"
+
+ version('1.50.0', git='https://git.bioconductor.org/packages/affypdnn', commit='97ff68e9f51f31333c0330435ea23b212b3ed18a')
+
+ depends_on('r@3.4.0:3.4.9', when='@1.50.0')
+ depends_on('r-affy', type=('build', 'run'))