diff options
| author | George Young <A-N-Other@users.noreply.github.com> | 2023-09-14 18:34:22 +0100 |
|---|---|---|
| committer | GitHub <noreply@github.com> | 2023-09-14 13:34:22 -0400 |
| commit | 2d1cca2839e0721395e561b9b25816fd505f799c (patch) | |
| tree | 2ae84ed12cd73b6f17209b142d4a33ce619046d4 | |
| parent | 8dae369a6987bb8353afbe81a1abc1dc93fb62fb (diff) | |
| download | spack-2d1cca2839e0721395e561b9b25816fd505f799c.tar.gz spack-2d1cca2839e0721395e561b9b25816fd505f799c.tar.bz2 spack-2d1cca2839e0721395e561b9b25816fd505f799c.tar.xz spack-2d1cca2839e0721395e561b9b25816fd505f799c.zip | |
gffread: new package @0.12.7 (#40015)
Co-authored-by: LMS Bioinformatics <bioinformatics@lms.mrc.ac.uk>
| -rw-r--r-- | var/spack/repos/builtin/packages/gffread/package.py | 23 |
1 files changed, 23 insertions, 0 deletions
diff --git a/var/spack/repos/builtin/packages/gffread/package.py b/var/spack/repos/builtin/packages/gffread/package.py new file mode 100644 index 0000000000..3757aa52c1 --- /dev/null +++ b/var/spack/repos/builtin/packages/gffread/package.py @@ -0,0 +1,23 @@ +# Copyright 2013-2023 Lawrence Livermore National Security, LLC and other +# Spack Project Developers. See the top-level COPYRIGHT file for details. +# +# SPDX-License-Identifier: (Apache-2.0 OR MIT) + +from spack.package import * + + +class Gffread(MakefilePackage): + """gffread: GFF/GTF utility providing format conversions, region filtering, + FASTA sequence extraction and more""" + + homepage = "http://ccb.jhu.edu/software/stringtie/gff.shtml#gffread" + url = "https://github.com/gpertea/gffread/releases/download/v0.12.7/gffread-0.12.7.tar.gz" + + version("0.12.7", sha256="bfde1c857495e578f5b3af3c007a9aa40593e69450eafcc6a42c3e8ef08ed1f5") + + def build(self, spec, prefix): + make("release") + + def install(self, spec, prefix): + mkdir(prefix.bin) + install("gffread", prefix.bin) |