py-smote-variants: Added package py-smote-variants (#42502)

* py-smote-variants: Added package py-smote-variants

Also added py-minisom and py-metric-learn as dependencies

* py-metric-learn: Added build dependency on setuptools

* py-smote-variants: Added a dependency on py-pytest-runner

As well as a comment about why statistics isn't included

* [@spackbot] updating style on behalf of alex391

---------

Co-authored-by: Alex C Leute <aclrc@rit.edu>

3 files changed, 91 insertions, 0 deletions

diff --git a/var/spack/repos/builtin/packages/py-metric-learn/package.py b/var/spack/repos/builtin/packages/py-metric-learn/package.py
new file mode 100644
index 0000000000..16b637c435
--- /dev/null
+++ b/var/spack/repos/builtin/packages/py-metric-learn/package.py
@@ -0,0 +1,26 @@
+# Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
+# Spack Project Developers. See the top-level COPYRIGHT file for details.
+#
+# SPDX-License-Identifier: (Apache-2.0 OR MIT)
+
+from spack.package import *
+
+
+class PyMetricLearn(PythonPackage):
+    """metric-learn contains efficient Python implementations of several
+    popular supervised and weakly-supervised metric learning algorithms. As
+    part of scikit-learn-contrib, the API of metric-learn is compatible with
+    scikit-learn, the leading library for machine learning in Python. This
+    allows to use all the scikit-learn routines (for pipelining, model
+    selection, etc) with metric learning algorithms through a unified
+    interface."""
+
+    homepage = "https://github.com/scikit-learn-contrib/metric-learn"
+    pypi = "metric-learn/metric-learn-0.7.0.tar.gz"
+
+    version("0.7.0", sha256="2b35246a1098d74163b16cc7779e0abfcbf9036050f4caa258e4fee55eb299cc")
+
+    depends_on("py-setuptools", type="build")
+    depends_on("py-numpy@1.11.0:", type=("build", "run"))
+    depends_on("py-scipy@0.17.0:", type=("build", "run"))
+    depends_on("py-scikit-learn@0.21.3:", type=("build", "run"))
diff --git a/var/spack/repos/builtin/packages/py-minisom/package.py b/var/spack/repos/builtin/packages/py-minisom/package.py
new file mode 100644
index 0000000000..37925b0414
--- /dev/null
+++ b/var/spack/repos/builtin/packages/py-minisom/package.py
@@ -0,0 +1,30 @@
+# Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
+# Spack Project Developers. See the top-level COPYRIGHT file for details.
+#
+# SPDX-License-Identifier: (Apache-2.0 OR MIT)
+
+from spack.package import *
+
+
+class PyMinisom(PythonPackage):
+    """MiniSom is a minimalistic and Numpy based implementation of the Self
+    Organizing Maps (SOM). SOM is a type of Artificial Neural Network able to
+    convert complex, nonlinear statistical relationships between
+    high-dimensional data items into simple geometric relationships on a
+    low-dimensional display. Minisom is designed to allow researchers to easily
+    build on top of it and to give students the ability to quickly grasp its
+    details.
+
+    The project initially aimed for a minimalistic implementation of the
+    Self-Organizing Map (SOM) algorithm, focusing on simplicity in features,
+    dependencies, and code style. Although it has expanded in terms of
+    features, it remains minimalistic by relying only on the numpy library and
+    emphasizing vectorization in coding style."""
+
+    homepage = "https://github.com/JustGlowing/minisom"
+    pypi = "MiniSom/MiniSom-2.3.1.tar.gz"
+
+    version("2.3.1", sha256="c0f1411616d7614fbd440a811975c12c7dfc091baea33efb49f5f4eabad7b966")
+
+    depends_on("py-numpy", type=("build", "run"))
+    depends_on("py-setuptools", type=("build"))
diff --git a/var/spack/repos/builtin/packages/py-smote-variants/package.py b/var/spack/repos/builtin/packages/py-smote-variants/package.py
new file mode 100644
index 0000000000..65c265a350
--- /dev/null
+++ b/var/spack/repos/builtin/packages/py-smote-variants/package.py
@@ -0,0 +1,35 @@
+# Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
+# Spack Project Developers. See the top-level COPYRIGHT file for details.
+#
+# SPDX-License-Identifier: (Apache-2.0 OR MIT)
+
+from spack.package import *
+
+
+class PySmoteVariants(PythonPackage):
+    """Variants of the synthetic minority oversampling technique (SMOTE) for
+    imbalanced learning"""
+
+    homepage = "https://github.com/analyticalmindsltd/smote_variants"
+    pypi = "smote_variants/smote_variants-0.7.3.tar.gz"
+
+    version("0.7.3", sha256="69497c764f101a76e8a3d4a9c80176704375c7aa5e26914f19222b59fb03b890")
+
+    depends_on("python@3.5:", type=("build", "run"))
+
+    depends_on("py-wheel@0.33.4:", type="build")
+    depends_on("py-setuptools@41.0.1:", type="build")
+    depends_on("py-pytest-runner", type="build")
+
+    depends_on("py-numpy", type=("build", "run"))
+    depends_on("py-scipy", type=("build", "run"))
+    depends_on("py-scikit-learn", type=("build", "run"))
+    depends_on("py-joblib", type=("build", "run"))
+    depends_on("py-minisom", type=("build", "run"))
+    depends_on("py-tensorflow", type=("build", "run"))
+    depends_on("py-keras", type=("build", "run"))
+    depends_on("py-pandas", type=("build", "run"))
+    depends_on("mkl")
+    depends_on("py-metric-learn", type=("build", "run"))
+    depends_on("py-seaborn", type=("build", "run"))
+    # Not including statistics, because is only needed for python 2