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authorGlenn Johnson <glenn-johnson@uiowa.edu>2021-01-19 02:10:21 -0600
committerGitHub <noreply@github.com>2021-01-19 09:10:21 +0100
commit82b10583f9f8c79cfae4d358f75d177a48a50add (patch)
tree275a18026b82364c369e457dab14740ca796db9d
parent5033250140ad34213af966c5416ad8d49df08677 (diff)
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r-grbase: added v1.8-6.7 (#21033)
-rw-r--r--var/spack/repos/builtin/packages/r-grbase/package.py24
1 files changed, 21 insertions, 3 deletions
diff --git a/var/spack/repos/builtin/packages/r-grbase/package.py b/var/spack/repos/builtin/packages/r-grbase/package.py
index fc841a3c08..eb9728fe94 100644
--- a/var/spack/repos/builtin/packages/r-grbase/package.py
+++ b/var/spack/repos/builtin/packages/r-grbase/package.py
@@ -7,20 +7,38 @@ from spack import *
class RGrbase(RPackage):
- """gRbase: A Package for Graphical Modelling in R"""
+ """A Package for Graphical Modelling in R
+
+ The 'gRbase' package provides graphical modelling features used by e.g. the
+ packages 'gRain', 'gRim' and 'gRc'. 'gRbase' implements graph algorithms
+ including (i) maximum cardinality search (for marked and unmarked graphs).
+ (ii) moralization, (iii) triangulation, (iv) creation of junction tree.
+ 'gRbase' facilitates array operations, 'gRbase' implements functions for
+ testing for conditional independence. 'gRbase' illustrates how hierarchical
+ log-linear models may be implemented and describes concept of graphical
+ meta data. The facilities of the package are documented in the book by
+ Hojsgaard, Edwards and Lauritzen (2012, <doi:10.1007/978-1-4614-2299-0>)
+ and in the paper by Dethlefsen and Hojsgaard, (2005,
+ <doi:10.18637/jss.v014.i17>). Please see 'citation("gRbase")' for citation
+ details. NOTICE 'gRbase' requires that the packages graph, 'Rgraphviz'
+ and 'RBGL' are installed from 'bioconductor'; for installation instructions
+ please refer to the web page given below."""
homepage = "http://people.math.aau.dk/~sorenh/software/gR/"
url = "https://cloud.r-project.org/src/contrib/gRbase_1.8-3.4.tar.gz"
list_url = "https://cloud.r-project.org/src/contrib/Archive/gRbase"
+ version('1.8-6.7', sha256='aaafc7e1b521de60e1a57c0175ac64d4283850c3273bd14774cf24dabc743388')
version('1.8-3.4', sha256='d35f94c2fb7cbd4ce3991570424dfe6723a849658da32e13df29f53b6ea2cc2c')
depends_on('r@3.0.2:', type=('build', 'run'))
+ depends_on('r@3.6.0:', when='@1.8-6.7:', type=('build', 'run'))
depends_on('r-graph', type=('build', 'run'))
+ depends_on('r-rgraphviz', when='@1.8-6.7:', type=('build', 'run'))
+ depends_on('r-rbgl', type=('build', 'run'))
depends_on('r-igraph', type=('build', 'run'))
depends_on('r-magrittr', type=('build', 'run'))
depends_on('r-matrix', type=('build', 'run'))
- depends_on('r-rbgl', type=('build', 'run'))
depends_on('r-rcpp@0.11.1:', type=('build', 'run'))
- depends_on('r-rcpparmadillo', type=('build', 'run'))
depends_on('r-rcppeigen', type=('build', 'run'))
+ depends_on('r-rcpparmadillo', type=('build', 'run'))