New package - r-survey

Analysis of complex survey samples.

1 files changed, 47 insertions, 0 deletions

diff --git a/var/spack/repos/builtin/packages/r-survey/package.py b/var/spack/repos/builtin/packages/r-survey/package.py
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+##############################################################################
+# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
+# Produced at the Lawrence Livermore National Laboratory.
+#
+# This file is part of Spack.
+# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
+# LLNL-CODE-647188
+#
+# For details, see https://github.com/llnl/spack
+# Please also see the LICENSE file for our notice and the LGPL.
+#
+# This program is free software; you can redistribute it and/or modify
+# it under the terms of the GNU Lesser General Public License (as
+# published by the Free Software Foundation) version 2.1, February 1999.
+#
+# This program is distributed in the hope that it will be useful, but
+# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
+# conditions of the GNU Lesser General Public License for more details.
+#
+# You should have received a copy of the GNU Lesser General Public
+# License along with this program; if not, write to the Free Software
+# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
+##############################################################################
+from spack import *
+
+
+class RSurvey(Package):
+    """Summary statistics, two-sample tests, rank tests, generalised linear
+    models, cumulative link models, Cox models, loglinear models, and general
+    maximum pseudolikelihood estimation for multistage stratified,
+    cluster-sampled, unequally weighted survey samples. Variances by Taylor
+    series linearisation or replicate weights. Post-stratification,
+    calibration, and raking. Two-phase subsampling designs. Graphics. PPS
+    sampling without replacement. Principal components, factor analysis."""
+
+    homepage = "http://r-survey.r-forge.r-project.org/survey/"
+    url      = "https://cran.r-project.org/src/contrib/survey_3.30-3.tar.gz"
+    list_url = "https://cran.r-project.org/src/contrib/Archive/survey"
+
+    version('3.30-3', 'c70cdae9cb43d35abddd11173d64cad0')
+
+    extends('R')
+
+    def install(self, spec, prefix):
+        R('CMD', 'INSTALL', '--library={0}'.format(self.module.r_lib_dir),
+          self.stage.source_path)