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| author | darmac <xiaojun2@hisilicon.com> | 2020-07-14 19:02:31 +0800 |
|---|---|---|
| committer | GitHub <noreply@github.com> | 2020-07-14 13:02:31 +0200 |
| commit | fa614404e6522273ec54ac5f7d7b88bd8a093152 (patch) | |
| tree | 347aad854af5688743ec147e08dd12ccad8a7aa8 | |
| parent | a6abd530bdbd426cf866cc5689b3a0162d8f7e78 (diff) | |
| download | spack-fa614404e6522273ec54ac5f7d7b88bd8a093152.tar.gz spack-fa614404e6522273ec54ac5f7d7b88bd8a093152.tar.bz2 spack-fa614404e6522273ec54ac5f7d7b88bd8a093152.tar.xz spack-fa614404e6522273ec54ac5f7d7b88bd8a093152.zip | |
smartdenovo: added patch to fix compile error (debian) (#17435)
| -rw-r--r-- | var/spack/repos/builtin/packages/smartdenovo/inline-limit.patch | 24 | ||||
| -rw-r--r-- | var/spack/repos/builtin/packages/smartdenovo/package.py | 4 |
2 files changed, 26 insertions, 2 deletions
diff --git a/var/spack/repos/builtin/packages/smartdenovo/inline-limit.patch b/var/spack/repos/builtin/packages/smartdenovo/inline-limit.patch new file mode 100644 index 0000000000..9a42bd29cd --- /dev/null +++ b/var/spack/repos/builtin/packages/smartdenovo/inline-limit.patch @@ -0,0 +1,24 @@ +diff -Nur smartdenovo/wtlay.h smartdenovo-new/wtlay.h +--- smartdenovo/wtlay.h 2020-07-09 02:47:13.503412360 +0800 ++++ smartdenovo-new/wtlay.h 2020-07-09 02:49:02.775412360 +0800 +@@ -503,17 +503,17 @@ + return e2; + } + +-inline int cut_biedge_strgraph_core(StringGraph *g, uint32_t node_id, int dir, uint32_t eidx, int closed){ ++static inline int cut_biedge_strgraph_core(StringGraph *g, uint32_t node_id, int dir, uint32_t eidx, int closed){ + edge_strgraph(g, node_id, dir, eidx)->closed = closed; + edge_partner_strgraph(g, node_id, dir, eidx)->closed = closed; + return 1; + } + +-inline int cut_biedge_strgraph(StringGraph *g, uint32_t node_id, int dir, uint32_t eidx){ ++static inline int cut_biedge_strgraph(StringGraph *g, uint32_t node_id, int dir, uint32_t eidx){ + return cut_biedge_strgraph_core(g, node_id, dir, eidx, 1); + } + +-inline int cut_biedge_strgraph2(StringGraph *g, uint32_t node_id, int dir, uint32_t eidx){ ++static inline int cut_biedge_strgraph2(StringGraph *g, uint32_t node_id, int dir, uint32_t eidx){ + return cut_biedge_strgraph_core(g, node_id, dir, eidx, 2); + } + diff --git a/var/spack/repos/builtin/packages/smartdenovo/package.py b/var/spack/repos/builtin/packages/smartdenovo/package.py index f18b8583d9..48109ea9e4 100644 --- a/var/spack/repos/builtin/packages/smartdenovo/package.py +++ b/var/spack/repos/builtin/packages/smartdenovo/package.py @@ -17,8 +17,8 @@ class Smartdenovo(MakefilePackage): depends_on('sse2neon', when='target=aarch64:') - patch('aarch64.patch', when='target=aarch64:', - sha256='7dd4bca28aafb0680cc1823aa58ac9000819993538e92628554666c4b3acc470') + patch('aarch64.patch', sha256='7dd4bca28aafb0680cc1823aa58ac9000819993538e92628554666c4b3acc470', when='target=aarch64:') + patch('inline-limit.patch', sha256='9f514ed72c37cf52ee2ffbe06f9ca1ed5a3e0819dab5876ecd83107c5e5bed81') def install(self, spec, prefix): install_files = [ |