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| author | snehring <7978778+snehring@users.noreply.github.com> | 2023-06-22 16:50:11 -0500 |
|---|---|---|
| committer | GitHub <noreply@github.com> | 2023-06-22 16:50:11 -0500 |
| commit | c96f93b2a3318e05ee6774afd5ebbdae4763fc2e (patch) | |
| tree | e9cabe716317f1152dc75db9368977f7b258490f /var/spack/repos/builtin/packages/emblmygff3/package.py | |
| parent | cbe4a4829197cebdd36ffd87087d91c4b2104c7f (diff) | |
| download | spack-c96f93b2a3318e05ee6774afd5ebbdae4763fc2e.tar.gz spack-c96f93b2a3318e05ee6774afd5ebbdae4763fc2e.tar.bz2 spack-c96f93b2a3318e05ee6774afd5ebbdae4763fc2e.tar.xz spack-c96f93b2a3318e05ee6774afd5ebbdae4763fc2e.zip | |
Emblmygff3 (#38515)
* py-bcbio-gff: adding new version 0.7.0
* emblmygff3: adding new package
* emblmygff3: adding py-setuptools dep
Diffstat (limited to 'var/spack/repos/builtin/packages/emblmygff3/package.py')
| -rw-r--r-- | var/spack/repos/builtin/packages/emblmygff3/package.py | 28 |
1 files changed, 28 insertions, 0 deletions
diff --git a/var/spack/repos/builtin/packages/emblmygff3/package.py b/var/spack/repos/builtin/packages/emblmygff3/package.py new file mode 100644 index 0000000000..7803efca76 --- /dev/null +++ b/var/spack/repos/builtin/packages/emblmygff3/package.py @@ -0,0 +1,28 @@ +# Copyright 2013-2023 Lawrence Livermore National Security, LLC and other +# Spack Project Developers. See the top-level COPYRIGHT file for details. +# +# SPDX-License-Identifier: (Apache-2.0 OR MIT) + +from spack.package import * + + +class Emblmygff3(PythonPackage): + """ + EMBLmyGFF3 converts an assembly in FASTA format along with associated + annotation in GFF3 format into the EMBL flat file format which is the + required format for submitting annotated assemblies to ENA. + """ + + homepage = "https://github.com/NBISweden/EMBLmyGFF3" + url = "https://github.com/NBISweden/EMBLmyGFF3/archive/refs/tags/v2.2.tar.gz" + + maintainers("snehring") + + version("2.2", sha256="225b2b50da9064f779e164b2859506d7540d11fa78f7d41b5c0d94f02f7845c5") + version("2.1", sha256="64aef403bc64088eca504b69acffb3fb16ec4448cd3d6c9692b7baf276b92fd2") + + depends_on("py-setuptools", type="build") + depends_on("python@3.8.0:", type=("build", "run")) + depends_on("py-biopython@1.78:", type=("build", "run")) + depends_on("py-bcbio-gff@0.6.4:", type=("build", "run")) + depends_on("py-numpy@1.22:", type=("build", "run")) |