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| author | George Hartzell <hartzell@alerce.com> | 2017-10-30 21:49:52 -0700 |
|---|---|---|
| committer | Christoph Junghans <christoph.junghans@gmail.com> | 2017-10-30 22:49:52 -0600 |
| commit | e69542c01959e7cf874c6ca1ae5c94d0c9a0ba1f (patch) | |
| tree | 235546b8f4c552304849f2bb4b5a2d3313617fc8 /var/spack/repos/builtin/packages/htslib | |
| parent | 10b27ec788edaaa6d9e484288fb6acc8d9b6643c (diff) | |
| download | spack-e69542c01959e7cf874c6ca1ae5c94d0c9a0ba1f.tar.gz spack-e69542c01959e7cf874c6ca1ae5c94d0c9a0ba1f.tar.bz2 spack-e69542c01959e7cf874c6ca1ae5c94d0c9a0ba1f.tar.xz spack-e69542c01959e7cf874c6ca1ae5c94d0c9a0ba1f.zip | |
Fix tarball URL's for htslib (#5993)
A recent update (#5907) to htslib added a different URL for an old
version of htslib.
Now the package is using that URL as the pattern for the newer
versions too.
I have a vague memory of running into this before, that it's a known
issue.
This fixes it by adding an explicit `url_for_version` routine.
Diffstat (limited to 'var/spack/repos/builtin/packages/htslib')
| -rw-r--r-- | var/spack/repos/builtin/packages/htslib/package.py | 13 |
1 files changed, 10 insertions, 3 deletions
diff --git a/var/spack/repos/builtin/packages/htslib/package.py b/var/spack/repos/builtin/packages/htslib/package.py index 7fdc79406e..6880dcf398 100644 --- a/var/spack/repos/builtin/packages/htslib/package.py +++ b/var/spack/repos/builtin/packages/htslib/package.py @@ -29,13 +29,11 @@ class Htslib(AutotoolsPackage): """C library for high-throughput sequencing data formats.""" homepage = "https://github.com/samtools/htslib" - url = "https://github.com/samtools/htslib/releases/download/1.3.1/htslib-1.3.1.tar.bz2" version('1.6', 'd6fd14e208aca7e08cbe9072233d0af9') version('1.4', '2a22ff382654c033c40e4ec3ea880050') version('1.3.1', '16d78f90b72f29971b042e8da8be6843') - version('1.2', '64026d659c3b062cfb6ddc8a38e9779f', - url='https://github.com/samtools/htslib/archive/1.2.tar.gz') + version('1.2', '64026d659c3b062cfb6ddc8a38e9779f') depends_on('zlib') depends_on('bzip2', when="@1.4:") @@ -45,3 +43,12 @@ class Htslib(AutotoolsPackage): depends_on('autoconf', when="@1.2") depends_on('automake', when="@1.2") depends_on('libtool', when="@1.2") + + # v1.2 uses the automagically assembled tarball from .../archive/... + # everything else uses the tarballs uploaded to the release + def url_for_version(self, version): + if version.string == '1.2': + return 'https://github.com/samtools/htslib/archive/1.2.tar.gz' + else: + url = "https://github.com/samtools/htslib/releases/download/{0}/htslib-{0}.tar.bz2" + return url.format(version.dotted) |