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authorErik Heeren <erik.heeren@epfl.ch>2023-10-28 14:55:49 +0200
committerGitHub <noreply@github.com>2023-10-28 07:55:49 -0500
commit7da4b3569f155c436c8932fbcb8626ba576bcc26 (patch)
tree99fee23513ca0f9f377a541fb44282f976d286e4 /var/spack/repos/builtin/packages/py-bluepyemodel/package.py
parentf8aa66b62ef3262856ecb4de383b6dc09540a2ab (diff)
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py-bluepyemodel: opensourcing with dependencies (#40592)
* py-bluepyemodel: new package with dependencies * py-morphio: add MPI as dependency to avoid failing builds * Formatting * py-bluepyefe: no need to set NEURON_INIT_MPI * py-morphio: unifurcation branch is ancient history * py-bluepyopt: only set NEURON_INIT_MPI with +neuron * py-efel: get rid of old version * py-morph{-tool,io}: rename develop to master to match branch * py-bluepyefe: unset PMI_RANK is also neuron-related * py-bluepyopt: PMI_RANK is also neuron-related * Implement review remarks * py-morph-tool, py-neurom: small fixes * py-morphio: reword dependencies
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diff --git a/var/spack/repos/builtin/packages/py-bluepyemodel/package.py b/var/spack/repos/builtin/packages/py-bluepyemodel/package.py
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+++ b/var/spack/repos/builtin/packages/py-bluepyemodel/package.py
@@ -0,0 +1,36 @@
+# Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
+# Spack Project Developers. See the top-level COPYRIGHT file for details.
+#
+# SPDX-License-Identifier: (Apache-2.0 OR MIT)
+
+from spack.package import *
+
+
+class PyBluepyemodel(PythonPackage):
+ """Python library to optimize and evaluate electrical models."""
+
+ homepage = "https://github.com/BlueBrain/BluePyEModel"
+ pypi = "bluepyemodel/bluepyemodel-0.0.46.tar.gz"
+
+ version("0.0.46", sha256="ad4c125e491f3337fcc341a4f389b8a616d883ce50fd77d9fb0ea6e13be5da61")
+
+ depends_on("py-setuptools", type="build")
+ depends_on("py-setuptools-scm", type="build")
+
+ depends_on("py-numpy", type=("build", "run"))
+ depends_on("py-scipy", type=("build", "run"))
+ depends_on("py-pandas", type=("build", "run"))
+ depends_on("py-ipyparallel@6.3:", type=("build", "run"))
+ depends_on("py-tqdm", type=("build", "run"))
+ depends_on("py-pyyaml", type=("build", "run"))
+ depends_on("py-gitpython", type=("build", "run"))
+ depends_on("py-bluepyopt@1.12.12:", type=("build", "run"))
+ depends_on("py-bluepyefe@2.2.0:", type=("build", "run"))
+ depends_on("py-neurom@3.0:3", type=("build", "run"))
+ depends_on("py-efel@3.1:", type=("build", "run"))
+ depends_on("py-configparser", type=("build", "run"))
+ depends_on("py-morph-tool@2.8:", type=("build", "run"))
+ depends_on("py-fasteners@0.16:", type=("build", "run"))
+ depends_on("neuron+python@8.0:", type=("build", "run"))
+ depends_on("py-jinja2@3.0.3", when="@0.0.11:", type=("build", "run"))
+ depends_on("py-currentscape@0.0.11:", type=("build", "run"))