Add package py-macs3 and dependencies (#40498)

* py-cykhash: adding new package py-cykhash

* py-hmmlearn: adding new package py-hmmlearn

* py-macs3: adding new package py-macs3

* py-macs3: adding python version restriction and other changes.

1 files changed, 26 insertions, 0 deletions

diff --git a/var/spack/repos/builtin/packages/py-macs3/package.py b/var/spack/repos/builtin/packages/py-macs3/package.py
new file mode 100644
index 0000000000..be94b9c290
--- /dev/null
+++ b/var/spack/repos/builtin/packages/py-macs3/package.py
@@ -0,0 +1,26 @@
+# Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
+# Spack Project Developers. See the top-level COPYRIGHT file for details.
+#
+# SPDX-License-Identifier: (Apache-2.0 OR MIT)
+
+from spack.package import *
+
+
+class PyMacs3(PythonPackage):
+    """MACS: Model-based Analysis for ChIP-Seq"""
+
+    homepage = "https://github.com/macs3-project/MACS/"
+    pypi = "MACS3/MACS3-3.0.0b3.tar.gz"
+
+    maintainers("snehring")
+
+    version("3.0.0b3", sha256="caa794d4cfcd7368447eae15878505315dac44c21546e8fecebb3561e9cee362")
+
+    depends_on("python@3.9:", type=("build", "run"))
+
+    depends_on("py-setuptools@60.0:", type="build")
+    depends_on("py-cython@0.29:0", type=("build", "run"))
+
+    depends_on("py-numpy@1.19:", type=("build", "run"))
+    depends_on("py-cykhash@2", type=("build", "run"))
+    depends_on("py-hmmlearn@0.3:", type=("build", "run"))