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authorErik Heeren <erik.heeren@epfl.ch>2023-10-28 14:55:49 +0200
committerGitHub <noreply@github.com>2023-10-28 07:55:49 -0500
commit7da4b3569f155c436c8932fbcb8626ba576bcc26 (patch)
tree99fee23513ca0f9f377a541fb44282f976d286e4 /var/spack/repos/builtin/packages/py-morphio/package.py
parentf8aa66b62ef3262856ecb4de383b6dc09540a2ab (diff)
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py-bluepyemodel: opensourcing with dependencies (#40592)
* py-bluepyemodel: new package with dependencies * py-morphio: add MPI as dependency to avoid failing builds * Formatting * py-bluepyefe: no need to set NEURON_INIT_MPI * py-morphio: unifurcation branch is ancient history * py-bluepyopt: only set NEURON_INIT_MPI with +neuron * py-efel: get rid of old version * py-morph{-tool,io}: rename develop to master to match branch * py-bluepyefe: unset PMI_RANK is also neuron-related * py-bluepyopt: PMI_RANK is also neuron-related * Implement review remarks * py-morph-tool, py-neurom: small fixes * py-morphio: reword dependencies
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diff --git a/var/spack/repos/builtin/packages/py-morphio/package.py b/var/spack/repos/builtin/packages/py-morphio/package.py
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+++ b/var/spack/repos/builtin/packages/py-morphio/package.py
@@ -0,0 +1,30 @@
+# Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
+# Spack Project Developers. See the top-level COPYRIGHT file for details.
+#
+# SPDX-License-Identifier: (Apache-2.0 OR MIT)
+
+import sys
+
+from spack.package import *
+
+
+class PyMorphio(PythonPackage):
+ """Python library for reading / writing morphology files"""
+
+ homepage = "https://github.com/BlueBrain/MorphIO"
+ git = "https://github.com/BlueBrain/MorphIO.git"
+ pypi = "morphio/MorphIO-3.3.2.tar.gz"
+
+ version("master", branch="master", submodules=True)
+
+ version("3.3.6", sha256="0f2e55470d92a3d89f2141ae905ee104fd16257b93dafb90682d90171de2f4e6")
+
+ depends_on("py-setuptools@24.2:", type="build")
+ depends_on("py-setuptools-scm", type="build")
+
+ depends_on("ninja", type="build")
+ depends_on("cmake@3.2:", type="build")
+ depends_on("py-numpy@1.14.1:", type=("build", "run"))
+ depends_on("py-h5py@3", when="platform=windows", type=("build", "run"))
+ if sys.platform != "win32":
+ depends_on("hdf5")