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authorlingnanyuan <1297162327@qq.com>2017-10-24 04:19:19 -0500
committerTodd Gamblin <tgamblin@llnl.gov>2017-10-24 11:19:19 +0200
commit420048350fddfd32f7e1577b8e4b6c7fe3e9ea0a (patch)
tree3ce6496fd46537b09aa093c25a623460e234ef64 /var/spack/repos/builtin/packages/r-a4base
parentf9f0c1472f96e7edc0d4a73fee2e6c9f8d6ffce1 (diff)
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bioconductor update (#5786)
* r-a4: Add r dependency and update url. * r-a4base: Add r dependency and update url. * r-a4classif: update url and add r dependency. * r-a4core: Update url and add r dependency. * r-a4preproc: Update url and add r dependency. * r-a4reporting: Update url and add r dependency. * r-abaenrichment: Update url and add r dependency. * r-absseq: Update url and add r dependency. * r-acgh: Update url and add r dependency. * r-acme: Update url and add r dependency. * r-adsplit: Update url and add r dependency. * r-affxparser: Update url and add r dependency. * r-affycomp: Update url and add r dependency. * r-affycompatible: Update url and add r dependency. * r-affycontam: Update url and add r dependency. * r-annaffy: Update url and add r dependency. * r-annotate: Update url and add r dependency. * r-annotate: Update url and add r dependency. * r-annotationdbi: Update url and add r dependency. * r-genefilter: Update url and add r dependency. * r-mlinterfaces: Update url and add r dependency. * r-limma: Update url and add r dependency. * r-multtest: Update url and add r dependency. * r-a4classif: Correct format. * r-affycomp: Correct error.
Diffstat (limited to 'var/spack/repos/builtin/packages/r-a4base')
-rw-r--r--var/spack/repos/builtin/packages/r-a4base/package.py5
1 files changed, 3 insertions, 2 deletions
diff --git a/var/spack/repos/builtin/packages/r-a4base/package.py b/var/spack/repos/builtin/packages/r-a4base/package.py
index 8e02f52214..c04cb33de7 100644
--- a/var/spack/repos/builtin/packages/r-a4base/package.py
+++ b/var/spack/repos/builtin/packages/r-a4base/package.py
@@ -29,10 +29,11 @@ class RA4base(RPackage):
"""Automated Affymetrix Array Analysis."""
homepage = "https://www.bioconductor.org/packages/a4Base/"
- url = "https://www.bioconductor.org/packages/release/bioc/src/contrib/a4Base_1.24.0.tar.gz"
+ url = "'https://git.bioconductor.org/packages/a4Base'"
list_url = homepage
- version('1.24.0', '98f53cb437f1b8bb7ba8c2628c0f44c6')
+ version('1.24.0', git='https://git.bioconductor.org/packages/a4Base', commit='f674afe424a508df2c8ee6c87a06fbd4aa410ef6')
+ depends_on('r@3.4.0:3.4.9', when='@1.24.0')
depends_on('r-biobase', type=('build', 'run'))
depends_on('r-annotationdbi', type=('build', 'run'))
depends_on('r-annaffy', type=('build', 'run'))