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| author | Glenn Johnson <glenn-johnson@uiowa.edu> | 2023-01-16 19:55:06 -0600 |
|---|---|---|
| committer | GitHub <noreply@github.com> | 2023-01-17 02:55:06 +0100 |
| commit | b2cc36109f8a0db954349427a3a79c191010797a (patch) | |
| tree | e9b6f9a577cfd6be903470da0b8f222be071084b /var | |
| parent | 1262dcfb9f2ec5eab9e3ffb0dfc2fa5741072a76 (diff) | |
| download | spack-b2cc36109f8a0db954349427a3a79c191010797a.tar.gz spack-b2cc36109f8a0db954349427a3a79c191010797a.tar.bz2 spack-b2cc36109f8a0db954349427a3a79c191010797a.tar.xz spack-b2cc36109f8a0db954349427a3a79c191010797a.zip | |
stringtie: add version 2.2.1 and fix build (#34973)
- stringtie uses internal samtools so remove dependency on samtools
- add dependency for zlib
- use make release target to get correct flags
Diffstat (limited to 'var')
| -rw-r--r-- | var/spack/repos/builtin/packages/stringtie/package.py | 6 |
1 files changed, 5 insertions, 1 deletions
diff --git a/var/spack/repos/builtin/packages/stringtie/package.py b/var/spack/repos/builtin/packages/stringtie/package.py index db954d05a5..df476b30a9 100644 --- a/var/spack/repos/builtin/packages/stringtie/package.py +++ b/var/spack/repos/builtin/packages/stringtie/package.py @@ -13,11 +13,15 @@ class Stringtie(MakefilePackage): homepage = "https://ccb.jhu.edu/software/stringtie" url = "https://github.com/gpertea/stringtie/archive/v1.3.3b.tar.gz" + version("2.2.1", sha256="19592aa37e293f4dcd684a4c6e0a1439ee34876d9f22944fb4edceba8c09631b") version("1.3.4d", sha256="0134c0adc264efd31a1df4301b33bfcf3b3fe96bd3990ce3df90819bad9af968") version("1.3.4a", sha256="6164a5fa9bf8807ef68ec89f47e3a61fe57fa07fe858f52fb6627f705bf71add") version("1.3.3b", sha256="30e8a3a29b474f0abeef1540d9b4624a827d8b29d7347226d86a38afea28bc0f") - depends_on("samtools") + depends_on("zlib") + + def build(self, spec, prefix): + make("release") def install(self, spec, prefix): mkdirp(prefix.bin) |