r-globaltest: new package (#23098)

1 files changed, 26 insertions, 0 deletions

diff --git a/var/spack/repos/builtin/packages/r-globaltest/package.py b/var/spack/repos/builtin/packages/r-globaltest/package.py
new file mode 100644
index 0000000000..3d45b6648e
--- /dev/null
+++ b/var/spack/repos/builtin/packages/r-globaltest/package.py
@@ -0,0 +1,26 @@
+# Copyright 2013-2021 Lawrence Livermore National Security, LLC and other
+# Spack Project Developers. See the top-level COPYRIGHT file for details.
+#
+# SPDX-License-Identifier: (Apache-2.0 OR MIT)
+
+from spack import *
+
+
+class RGlobaltest(RPackage):
+    """Testing Groups of Covariates/Features for Association with a Response
+    Variable, with Applications to Gene Set Testing:
+
+    The global test tests groups of covariates (or features) for association
+    with a response variable. This package implements the test with diagnostic
+    plots and multiple testing utilities, along with several functions to
+    facilitate the use of this test for gene set testing of GO and KEGG
+    terms."""
+
+    bioc     = "globaltest"
+
+    version('5.44.0', commit='571933d5c779a241740be913ff49ecdd59bcbc45')
+
+    depends_on('r-survival', type=('build', 'run'))
+    depends_on('r-biobase', type=('build', 'run'))
+    depends_on('r-annotationdbi', type=('build', 'run'))
+    depends_on('r-annotate', type=('build', 'run'))