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author | Glenn Johnson <glenn-johnson@uiowa.edu> | 2021-04-20 04:34:13 -0500 |
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committer | GitHub <noreply@github.com> | 2021-04-20 11:34:13 +0200 |
commit | 6cf91449d476e8bcc2ebc1c407188ea614590053 (patch) | |
tree | f20de9ddfca6f72844f276a88fb038020378b3ac /var | |
parent | ba9eb19e5d70b71142259cb9feb39f7827dec830 (diff) | |
download | spack-6cf91449d476e8bcc2ebc1c407188ea614590053.tar.gz spack-6cf91449d476e8bcc2ebc1c407188ea614590053.tar.bz2 spack-6cf91449d476e8bcc2ebc1c407188ea614590053.tar.xz spack-6cf91449d476e8bcc2ebc1c407188ea614590053.zip |
r-globaltest: new package (#23098)
Diffstat (limited to 'var')
-rw-r--r-- | var/spack/repos/builtin/packages/r-globaltest/package.py | 26 |
1 files changed, 26 insertions, 0 deletions
diff --git a/var/spack/repos/builtin/packages/r-globaltest/package.py b/var/spack/repos/builtin/packages/r-globaltest/package.py new file mode 100644 index 0000000000..3d45b6648e --- /dev/null +++ b/var/spack/repos/builtin/packages/r-globaltest/package.py @@ -0,0 +1,26 @@ +# Copyright 2013-2021 Lawrence Livermore National Security, LLC and other +# Spack Project Developers. See the top-level COPYRIGHT file for details. +# +# SPDX-License-Identifier: (Apache-2.0 OR MIT) + +from spack import * + + +class RGlobaltest(RPackage): + """Testing Groups of Covariates/Features for Association with a Response + Variable, with Applications to Gene Set Testing: + + The global test tests groups of covariates (or features) for association + with a response variable. This package implements the test with diagnostic + plots and multiple testing utilities, along with several functions to + facilitate the use of this test for gene set testing of GO and KEGG + terms.""" + + bioc = "globaltest" + + version('5.44.0', commit='571933d5c779a241740be913ff49ecdd59bcbc45') + + depends_on('r-survival', type=('build', 'run')) + depends_on('r-biobase', type=('build', 'run')) + depends_on('r-annotationdbi', type=('build', 'run')) + depends_on('r-annotate', type=('build', 'run')) |