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authorAdam J. Stewart <ajstewart426@gmail.com>2021-02-25 04:33:38 -0600
committerGitHub <noreply@github.com>2021-02-25 11:33:38 +0100
commit127a630ba35e9742176dc07f64a2fb7368f8084b (patch)
tree4213ed8e6d488d372d9ceae6378d2a9a75f9af84 /var
parent719bdb1673ec25ebf3c693e4bcafc0273f3ec1e3 (diff)
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py-numcodecs: add v0.7.3, apple clang patch (#21944)
* py-numcodecs: add new version, apple clang patch * py-numcodecs: add new version, apple clang patch
Diffstat (limited to 'var')
-rw-r--r--var/spack/repos/builtin/packages/py-numcodecs/apple-clang-12.patch14
-rw-r--r--var/spack/repos/builtin/packages/py-numcodecs/package.py14
2 files changed, 25 insertions, 3 deletions
diff --git a/var/spack/repos/builtin/packages/py-numcodecs/apple-clang-12.patch b/var/spack/repos/builtin/packages/py-numcodecs/apple-clang-12.patch
new file mode 100644
index 0000000000..818bba165c
--- /dev/null
+++ b/var/spack/repos/builtin/packages/py-numcodecs/apple-clang-12.patch
@@ -0,0 +1,14 @@
+https://github.com/Blosc/c-blosc/issues/316
+diff --git a/c-blosc/internal-complibs/zlib-1.2.8/gzguts.h b/c-blosc/internal-complibs/zlib-1.2.8/gzguts.h
+index d87659d..f6823ed 100644
+--- a/c-blosc/internal-complibs/zlib-1.2.8/gzguts.h
++++ b/c-blosc/internal-complibs/zlib-1.2.8/gzguts.h
+@@ -26,6 +26,7 @@
+ # include <limits.h>
+ #endif
+ #include <fcntl.h>
++#include <unistd.h>
+
+ #ifdef _WIN32
+ # include <stddef.h>
+
diff --git a/var/spack/repos/builtin/packages/py-numcodecs/package.py b/var/spack/repos/builtin/packages/py-numcodecs/package.py
index ccd7c9ceb2..d3b4c647f3 100644
--- a/var/spack/repos/builtin/packages/py-numcodecs/package.py
+++ b/var/spack/repos/builtin/packages/py-numcodecs/package.py
@@ -14,12 +14,20 @@ class PyNumcodecs(PythonPackage):
homepage = "https://github.com/zarr-developers/numcodecs"
pypi = "numcodecs/numcodecs-0.6.4.tar.gz"
+ git = "https://github.com/zarr-developers/numcodecs.git"
+ version('master', branch='master', submodules=True)
+ version('0.7.3', sha256='022b12ad83eb623ec53f154859d49f6ec43b15c36052fa864eaf2d9ee786dd85')
version('0.6.4', sha256='ef4843d5db4d074e607e9b85156835c10d006afc10e175bda62ff5412fca6e4d')
variant('msgpack', default=False, description='Codec to encode data as msgpacked bytes.')
- depends_on('py-setuptools@18.0:', type='build')
- depends_on('py-setuptools-scm@1.5.4:', type=('build', 'run'))
- depends_on('py-numpy@1.7:', type=('build', 'run'))
+ depends_on('python@3.6:3.999', when='@0.7:', type=('build', 'link', 'run'))
+ depends_on('python@2.7:2.8,3.5:', when='@:0.6.999', type=('build', 'link', 'run'))
+ depends_on('py-setuptools@18.1:', type='build')
+ depends_on('py-setuptools-scm@1.5.5:', type='build')
+ depends_on('py-cython', type='build')
+ depends_on('py-numpy@1.7:', type=('build', 'run'))
depends_on('py-msgpack', type=('build', 'run'), when='+msgpack')
+
+ patch('apple-clang-12.patch', when='%apple-clang@12:')