summaryrefslogtreecommitdiff
path: root/var
diff options
context:
space:
mode:
authorJeffrey Salmond <js947@users.noreply.github.com>2019-10-14 09:49:31 +0100
committerMassimiliano Culpo <massimiliano.culpo@gmail.com>2019-10-14 10:49:31 +0200
commit2bb1bae2ae42770bcc122816f22a2a3a7031ef78 (patch)
treead33ebcb97dbf9ad3cd24e810247c10c3dd5a727 /var
parentc851cfd1226c6a5db69813d06c82d7631dadbb71 (diff)
downloadspack-2bb1bae2ae42770bcc122816f22a2a3a7031ef78.tar.gz
spack-2bb1bae2ae42770bcc122816f22a2a3a7031ef78.tar.bz2
spack-2bb1bae2ae42770bcc122816f22a2a3a7031ef78.tar.xz
spack-2bb1bae2ae42770bcc122816f22a2a3a7031ef78.zip
dialign: added new package at version 2.2.1 (#13130)
Co-Authored-By: Adam J. Stewart <ajstewart426@gmail.com>
Diffstat (limited to 'var')
-rw-r--r--var/spack/repos/builtin/packages/dialign/package.py28
1 files changed, 28 insertions, 0 deletions
diff --git a/var/spack/repos/builtin/packages/dialign/package.py b/var/spack/repos/builtin/packages/dialign/package.py
new file mode 100644
index 0000000000..5a8e6b7d7c
--- /dev/null
+++ b/var/spack/repos/builtin/packages/dialign/package.py
@@ -0,0 +1,28 @@
+# Copyright 2013-2019 Lawrence Livermore National Security, LLC and other
+# Spack Project Developers. See the top-level COPYRIGHT file for details.
+#
+# SPDX-License-Identifier: (Apache-2.0 OR MIT)
+
+from spack import *
+
+
+class Dialign(MakefilePackage):
+ """DIALIGN is a software program for multiple sequence alignment developed
+ by Burkhard Morgenstern et al.."""
+
+ homepage = "https://bibiserv.cebitec.uni-bielefeld.de/dialign"
+ url = "https://bibiserv.cebitec.uni-bielefeld.de/applications/dialign/resources/downloads/dialign-2.2.1-src.tar.gz"
+
+ version('2.2.1', sha256='046361bb4ca6e4ab2ac5e634cfcd673f964a887006c09c1b8bd3310fac86f519')
+
+ build_directory = 'src'
+
+ def install(self, spec, prefix):
+ mkdirp(prefix.bin)
+ install(join_path('src', 'dialign2-2'), prefix.bin)
+
+ mkdirp(prefix.share)
+ install_tree('dialign2_dir', prefix.share)
+
+ def setup_environment(self, spack_env, run_env):
+ run_env.set('DIALIGN2_DIR', self.prefix.share)