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authorJames Beal <james.beal+github@sanger.ac.uk>2024-02-12 10:09:05 +0000
committerGitHub <noreply@github.com>2024-02-12 11:09:05 +0100
commit727eaf3c823b949d7fa6980dda6946b8d042ccad (patch)
tree0ff769529f12af954c599d99d872deab2eb540f5 /var
parentd014671bcb1e3edfb2fee8c5a100f0258a2faa7b (diff)
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samtools: add v1.19.2 (#42550)
Co-authored-by: James Beal <jb23@sanger.ac.uk>
Diffstat (limited to 'var')
-rw-r--r--var/spack/repos/builtin/packages/htslib/package.py1
-rw-r--r--var/spack/repos/builtin/packages/samtools/package.py2
2 files changed, 3 insertions, 0 deletions
diff --git a/var/spack/repos/builtin/packages/htslib/package.py b/var/spack/repos/builtin/packages/htslib/package.py
index 8c7f319444..3da320625b 100644
--- a/var/spack/repos/builtin/packages/htslib/package.py
+++ b/var/spack/repos/builtin/packages/htslib/package.py
@@ -16,6 +16,7 @@ class Htslib(AutotoolsPackage):
license("MIT AND BSD-3-Clause-Modification")
+ version("1.19.1", sha256="222d74d3574fb67b158c6988c980eeaaba8a0656f5e4ffb76b5fa57f035933ec")
version("1.19", sha256="8751c40c4fa7d1f23a6864c5b20a73744f8be68239535ae7729c5f7d394d0736")
version("1.18", sha256="f1ab53a593a2320a1bfadf4ef915dae784006c5b5c922c8a8174d7530a9af18f")
version("1.17", sha256="763779288c40f07646ec7ad98b96c378c739171d162ad98398868783b721839f")
diff --git a/var/spack/repos/builtin/packages/samtools/package.py b/var/spack/repos/builtin/packages/samtools/package.py
index 2561b563ad..c6b0018ecf 100644
--- a/var/spack/repos/builtin/packages/samtools/package.py
+++ b/var/spack/repos/builtin/packages/samtools/package.py
@@ -18,6 +18,7 @@ class Samtools(Package):
license("MIT")
+ version("1.19.2", sha256="71f60499668e4c08e7d745fbff24c15cc8a0977abab1acd5d2bb419bdb065e96")
version("1.19", sha256="fa6b3b18e20851b6f3cb55afaf3205d02fcb79dae3b849fcf52e8fc10ff08b83")
version("1.18", sha256="d686ffa621023ba61822a2a50b70e85d0b18e79371de5adb07828519d3fc06e1")
version("1.17", sha256="3adf390b628219fd6408f14602a4c4aa90e63e18b395dad722ab519438a2a729")
@@ -49,6 +50,7 @@ class Samtools(Package):
depends_on("python", type="run")
# htslib became standalone @1.3.1, must use corresponding version
+ depends_on("htslib@1.19.1", when="@1.19.2")
depends_on("htslib@1.19", when="@1.19")
depends_on("htslib@1.18", when="@1.18")
depends_on("htslib@1.17", when="@1.17")