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author健美猞猁 <weijianwen@gmail.com>2018-08-13 07:54:50 +0800
committerAdam J. Stewart <ajstewart426@gmail.com>2018-08-12 18:54:50 -0500
commit7a5d54760e8b5754aab3f78b732a94392971a6c0 (patch)
tree79f6347b0db5a4203e37006d4c55f32cab9038eb /var
parentc68fa10e6b085df1c8fe37a222072868788dc98f (diff)
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Add samtools 1.9 (#8961)
* Add smtools 1.9. * Add hstlib 1.9.
Diffstat (limited to 'var')
-rw-r--r--var/spack/repos/builtin/packages/htslib/package.py1
-rw-r--r--var/spack/repos/builtin/packages/samtools/package.py2
2 files changed, 3 insertions, 0 deletions
diff --git a/var/spack/repos/builtin/packages/htslib/package.py b/var/spack/repos/builtin/packages/htslib/package.py
index ba9fcc5edb..d2318b6e0f 100644
--- a/var/spack/repos/builtin/packages/htslib/package.py
+++ b/var/spack/repos/builtin/packages/htslib/package.py
@@ -30,6 +30,7 @@ class Htslib(AutotoolsPackage):
homepage = "https://github.com/samtools/htslib"
+ version('1.9', '2ac92c9c3eef9986345ac69a05dd4d24')
version('1.8', '54e9b3a04251fa59b1878f6b546b5c79')
version('1.7', 'd3cc7e080a9a8c4161d8f62b56d3b98d')
version('1.6', 'd6fd14e208aca7e08cbe9072233d0af9')
diff --git a/var/spack/repos/builtin/packages/samtools/package.py b/var/spack/repos/builtin/packages/samtools/package.py
index ae379c55ab..dd59b78d36 100644
--- a/var/spack/repos/builtin/packages/samtools/package.py
+++ b/var/spack/repos/builtin/packages/samtools/package.py
@@ -33,6 +33,7 @@ class Samtools(Package):
homepage = "www.htslib.org"
url = "https://github.com/samtools/samtools/releases/download/1.3.1/samtools-1.3.1.tar.bz2"
+ version('1.9', 'cca9a40d9b91b007af2ff905cb8b5924')
version('1.8', 'c6e981c92ca00a44656a708c4b52aba3')
version('1.7', '2240175242b5183bfa6baf1483f68023')
version('1.6', 'b756f05fd5d1a7042074417edb8c9aea')
@@ -42,6 +43,7 @@ class Samtools(Package):
depends_on('ncurses')
# htslib became standalone @1.3.1, must use corresponding version
+ depends_on('htslib@1.9', when='@1.9')
depends_on('htslib@1.8', when='@1.8')
depends_on('htslib@1.7', when='@1.7')
depends_on('htslib@1.6', when='@1.6')