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authorsnehring <7978778+snehring@users.noreply.github.com>2023-06-05 15:44:51 -0500
committerGitHub <noreply@github.com>2023-06-05 16:44:51 -0400
commit7c11faceb080900e5ab52cf09ce0192a59b4310f (patch)
tree5483745a7c1e2c848249c644057e366e787d3cae /var
parent053550e28aaf3dedbc0d0f633f28997de89fc579 (diff)
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ninja-phylogeny: adding new package ninja-phylogeny (#38182)
Diffstat (limited to 'var')
-rw-r--r--var/spack/repos/builtin/packages/ninja-phylogeny/package.py28
1 files changed, 28 insertions, 0 deletions
diff --git a/var/spack/repos/builtin/packages/ninja-phylogeny/package.py b/var/spack/repos/builtin/packages/ninja-phylogeny/package.py
new file mode 100644
index 0000000000..bfbe660a55
--- /dev/null
+++ b/var/spack/repos/builtin/packages/ninja-phylogeny/package.py
@@ -0,0 +1,28 @@
+# Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
+# Spack Project Developers. See the top-level COPYRIGHT file for details.
+#
+# SPDX-License-Identifier: (Apache-2.0 OR MIT)
+
+from spack.package import *
+
+
+class NinjaPhylogeny(MakefilePackage):
+ """NINJA is software for inferring large-scale neighbor-joining phylogenies."""
+
+ homepage = "https://wheelerlab.org/software/ninja/"
+ url = "https://github.com/TravisWheelerLab/NINJA/archive/refs/tags/0.98-cluster_only.tar.gz"
+
+ maintainers("snehring")
+
+ version("0.98", sha256="55675e1a9d51eddb3decc9a7570b6bcddb12e8a922cf1ca0a1ea43995793c9db")
+
+ build_directory = "NINJA"
+
+ def edit(self, spec, prefix):
+ with working_dir("NINJA"):
+ filter_file(r"^CXX = g\+\+.*$", "", "Makefile")
+
+ def install(self, spec, prefix):
+ mkdirp(prefix.bin)
+ with working_dir("NINJA"):
+ install("Ninja", prefix.bin)