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| author | Justin Stanley <molecuul@users.noreply.github.com> | 2018-12-04 17:20:24 -0600 |
|---|---|---|
| committer | Adam J. Stewart <ajstewart426@gmail.com> | 2018-12-04 17:20:24 -0600 |
| commit | 87bf5296c38246e051b77ffb082a8881ab3d50c9 (patch) | |
| tree | 2921b1bbecc770c8058ad2eaa29d84594516a7d7 /var | |
| parent | 68a0305e13a4ec7df406dfe10f776ffe43fc49dd (diff) | |
| download | spack-87bf5296c38246e051b77ffb082a8881ab3d50c9.tar.gz spack-87bf5296c38246e051b77ffb082a8881ab3d50c9.tar.bz2 spack-87bf5296c38246e051b77ffb082a8881ab3d50c9.tar.xz spack-87bf5296c38246e051b77ffb082a8881ab3d50c9.zip | |
biobloom: new package at 2.2.0 (#10014)
Diffstat (limited to 'var')
| -rw-r--r-- | var/spack/repos/builtin/packages/biobloom/package.py | 27 |
1 files changed, 27 insertions, 0 deletions
diff --git a/var/spack/repos/builtin/packages/biobloom/package.py b/var/spack/repos/builtin/packages/biobloom/package.py new file mode 100644 index 0000000000..6aeea90b10 --- /dev/null +++ b/var/spack/repos/builtin/packages/biobloom/package.py @@ -0,0 +1,27 @@ +# Copyright 2013-2018 Lawrence Livermore National Security, LLC and other +# Spack Project Developers. See the top-level COPYRIGHT file for details. +# +# SPDX-License-Identifier: (Apache-2.0 OR MIT) + +from spack import * + + +class Biobloom(AutotoolsPackage): + """BioBloom Tools (BBT) provides the means to create filters for a given + reference and then to categorize sequences.""" + + homepage = "https://github.com/bcgsc/biobloom" + url = "https://github.com/bcgsc/biobloom/releases/download/2.2.0/biobloomtools-2.2.0.tar.gz" + + version('2.2.0', sha256='5d09f8690f0b6402f967ac09c5b0f769961f3fe3791000f8f73af6af7324f02c') + + depends_on('boost') + depends_on('sdsl-lite') + depends_on('sparsehash') + depends_on('zlib') + + def configure_args(self): + # newer versions of sdsl-lite introduce tolerable warnings + # they must disabled to allow the build to continue + + return ['CXXFLAGS=-w', 'CPPFLAGS=-w'] |