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author | Yifan Zhu <ifanzhu@foxmail.com> | 2017-09-28 20:11:02 -0500 |
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committer | becker33 <becker33@llnl.gov> | 2017-09-28 18:11:02 -0700 |
commit | b455fa2a7b58bbe89d8697a1f5cb4cce892ab4cf (patch) | |
tree | 923040cf185af040df49a7db918e88d9385a24e2 /var | |
parent | e42fd90df29ed822b138f2d7e1df1d86ed420c03 (diff) | |
download | spack-b455fa2a7b58bbe89d8697a1f5cb4cce892ab4cf.tar.gz spack-b455fa2a7b58bbe89d8697a1f5cb4cce892ab4cf.tar.bz2 spack-b455fa2a7b58bbe89d8697a1f5cb4cce892ab4cf.tar.xz spack-b455fa2a7b58bbe89d8697a1f5cb4cce892ab4cf.zip |
r-gcrma: created new package (#5500)
Diffstat (limited to 'var')
-rw-r--r-- | var/spack/repos/builtin/packages/r-gcrma/package.py | 42 |
1 files changed, 42 insertions, 0 deletions
diff --git a/var/spack/repos/builtin/packages/r-gcrma/package.py b/var/spack/repos/builtin/packages/r-gcrma/package.py new file mode 100644 index 0000000000..858b02e0e3 --- /dev/null +++ b/var/spack/repos/builtin/packages/r-gcrma/package.py @@ -0,0 +1,42 @@ +############################################################################## +# Copyright (c) 2013-2017, Lawrence Livermore National Security, LLC. +# Produced at the Lawrence Livermore National Laboratory. +# +# This file is part of Spack. +# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved. +# LLNL-CODE-647188 +# +# For details, see https://github.com/llnl/spack +# Please also see the NOTICE and LICENSE files for our notice and the LGPL. +# +# This program is free software; you can redistribute it and/or modify +# it under the terms of the GNU Lesser General Public License (as +# published by the Free Software Foundation) version 2.1, February 1999. +# +# This program is distributed in the hope that it will be useful, but +# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and +# conditions of the GNU Lesser General Public License for more details. +# +# You should have received a copy of the GNU Lesser General Public +# License along with this program; if not, write to the Free Software +# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA +############################################################################## +from spack import * + + +class RGcrma(RPackage): + """Background adjustment using sequence information""" + + homepage = "https://bioconductor.org/packages/gcrma/" + url = "https://bioconductor.org/packages/3.5/bioc/src/contrib/gcrma_2.48.0.tar.gz" + list_url = homepage + + version('2.48.0', 'c3a2f21c6f93458d1a123594e437a210') + + depends_on('r-affy', type=('build', 'run')) + depends_on('r-biobase', type=('build', 'run')) + depends_on('r-affyio', type=('build', 'run')) + depends_on('r-xvector', type=('build', 'run')) + depends_on('r-biostrings', type=('build', 'run')) + depends_on('r-biocinstaller', type=('build', 'run')) |